Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01638 ATGGCTTTCAATGGTGAAGAGAATCGCCTTTCATCTCTTAAAGAAGAGGAAAACAATGCATTCCTCTCTGCCAGTGCACTTGCCTGCGGTCCTATATCTACTGCAGTTCTAAATGCTGCACTTGAACTCAACATATTTGAGATCATAGCTAAGGCAAGCCCTCTTGGTGTCTCTGCCTCTGAAATAGCTTCTCAACTTCCTAAACAACACCCTGAATTGCCACGCAGGCTTGATCGCATGCTGTGTCTGCTTGCAAGCCACTCTCTTCTTACTTGTTCCACACGCCCGAAAAACGATTCTGGGATTGAAAGACTCTATCAATTAACATTGGCTGGTAAATATTTTGTCAATGATGAGAAAACTGGCTCACTGGCTCTATTTCCCACATATTATACTCACCGAGCAATGGTGGATGTTTTCCTCAATTTTAAGGAGGTGCTTTTGGACTGCGACTCAGACATATTCAACAAAATTAATGGAATGTCCTTTTACCAATGCATGCAACGAGACTCCGAATGGAATCACGTTTTTAACAAAGCCATGGTTAATCTTTGCATCATCAAGATGAATAAGATACTTGAAAAGTATAATGGATTTGAAGGAATATCACTGCTGGTTGATGTGGGGGGTGGTGTAGGTCAAAATTTGAACATGATAATGGCCAAATATCCTTCCATTAAGGGTATCAATTTTGATCTTCCCGAAGTGATACAAACTGCTCCTGCTTATCCAGGGATACAACATGTTGGGGGAGATATGTTTGAAGGTGTTCCCAAAGGTGACGCCATTATATTAAAGGTTGTATGTCACAATTGGTCTGATGAAAATTGCCTAAAACTTTTGAGGAATTGCTACAAAGCTTTGCCACCCAATGGGAAGGTGATAGTCGTCGACTTCGTAATGCCCGAAACAATTCAGTCATCTGAAGCACATAAGTTTGCTTCCTGCATGGACAACTCTATGTTTGTGTTCAATGGGAGAGAGAGAACGAAGAAGGAATTTGAGAATTTGTGCAAAGGATCTGGATTTTCTAAGTTTCAATTTGTTTGTCATGTTCTCTCAGTCATGGGAGTGATGGAATTTTATAAATAA 1092 0.4048 MAFNGEENRLSSLKEEENNAFLSASALACGPISTAVLNAALELNIFEIIAKASPLGVSASEIASQLPKQHPELPRRLDRMLCLLASHSLLTCSTRPKNDSGIERLYQLTLAGKYFVNDEKTGSLALFPTYYTHRAMVDVFLNFKEVLLDCDSDIFNKINGMSFYQCMQRDSEWNHVFNKAMVNLCIIKMNKILEKYNGFEGISLLVDVGGGVGQNLNMIMAKYPSIKGINFDLPEVIQTAPAYPGIQHVGGDMFEGVPKGDAIILKVVCHNWSDENCLKLLRNCYKALPPNGKVIVVDFVMPETIQSSEAHKFASCMDNSMFVFNGRERTKKEFENLCKGSGFSKFQFVCHVLSVMGVMEFYK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01638 363 Gene3D - 2 115 IPR036388 -
Rops3g01638 363 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
Rops3g01638 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 363 IPR016461 GO:0008168
Rops3g01638 363 Pfam Dimerisation domain 36 85 IPR012967 GO:0046983
Rops3g01638 363 Pfam O-methyltransferase domain 144 344 IPR001077 GO:0008171
Rops3g01638 363 PIRSF O-mtase 2 363 IPR016461 GO:0008168
Rops3g01638 363 SUPERFAMILY "Winged helix" DNA-binding domain 16 119 IPR036390 -
Rops3g01638 363 PANTHER O-METHYLTRANSFERASE 34 351 IPR016461 GO:0008168
Rops3g01638 363 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Rops3g01638 363 CDD AdoMet_MTases 205 301 - -
Rops3g01638 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 361 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01638 Rops-Chr3 25442529 25444485 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01638 7 355 Monolignol Biosynthesis Gene Families AT5G54160 46.875 3.00e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01638 - - gmx:100784030 491.115