Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01634 ATGTCATATACAACAACAGATATGACTACCATTGATGAATTAAAAAATATCGACACATGTCCTGGAATTGATGATATTGGTAGTGGTGGTGAGGCATTGCATTGTGATGGTACAAGTGGAGACCCAGAAGTAGGGATGTCGTTTACTTCTGAAGAAGACTTGAAATTATTTTATTCATCACATGCTTATAGAAAGGGTTTTGGATGGAAGATAAGGACTACCAAAAAGGCAGATGATGGGAAAATAAATTACATCATACTATCATGCTCAAGAGAGGGTAATCGTAAATCCTCCATATCAACTACATTGAAGACACTTCCAACAAAAGCAAAACATTGTAAGGCCAAGTTAACTGCTAGGTTAGAAGAAGATGGATGA 378 0.3651 MSYTTTDMTTIDELKNIDTCPGIDDIGSGGEALHCDGTSGDPEVGMSFTSEEDLKLFYSSHAYRKGFGWKIRTTKKADDGKINYIILSCSREGNRKSSISTTLKTLPTKAKHCKAKLTARLEEDG* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01634 125 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 125 - -
Rops3g01634 125 Pfam FAR1 DNA-binding domain 57 125 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01634 Rops-Chr3 25416763 25417140 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops3g01634 FAR1 1.4e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01634 - K01807 psat:127130074 113.62