Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01604 ATGACAGTGAAGCTCACTGTTCAAAACCGTCAAGCGAAGGTGACGGTGGTTCCGTTAGCGGCGGCGCTGGTCATCAAGGCTTTGAAGAACATCAAGCACAATGGCGATATTTCACTCGATGATGTTTCTAGATTAATCTATACAAATCAAGGGGTTGCAATCTTGGCTTTGGCAGCAAATGCTATTCACAAGCTTTGGAAATGGCAGAGAAATGATCATAACACTTTAGGGAAGGCCACTGCAAGTATTCAACCACAACTATGGCAACCATCCAGTGGAATATTGATGACTAACGATATAAGTGATACTAACTTAGAGGATGTTGTGTCATGTTTTGCACTGTCCAAGAGTGACCTGTATATACTTGGTTCACTTGGGTGCCCAGTATAG 390 0.4308 MTVKLTVQNRQAKVTVVPLAAALVIKALKNIKHNGDISLDDVSRLIYTNQGVAILALAANAIHKLWKWQRNDHNTLGKATASIQPQLWQPSSGILMTNDISDTNLEDVVSCFALSKSDLYILGSLGCPV* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01604 129 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 40 125 IPR027728 GO:0006355
Rops3g01604 129 Gene3D - 1 28 IPR036796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01604 Rops-Chr3 24931400 24932206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01604 1 45 Cytoplasmic Ribosomal Protein Gene Family AT3G53430 69.091 2.42e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01604 - - gmx:100805156 152.91