Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01582 ATGGAGGAGACACGAGAAGATTCAGGGCCGGCAGAGCAAAGGCCATCCAATGTGTCATGGTGGCCTTCAGATTTCGTTGAAAGATTTGGATCTGTTTCCTTGGGCTCTCAAGATGAGACCTTAAATAATAAAGAATCACCCAGACATGCTAACCAAGATTGTATGTCACCTCAGATGGCCTCAGAAATTCTCTGGCGCACCGGAATGCTTTTAGAACCAATACCAAATGGTTTTTATTCAGTTGTTCCGGAGAAAAGGCTCAAGACACTTTTTGATAGTATTCCTACTTTGGACGAGCTTCATGCTTTGGGTGGAGAGGGTTTTAGGGCTGATATCATTGTTGTGGATGCGGAGAAAGATAGAAAGTTATCTATGTTGAAGCAATTAATTCTGGCATTGGTTAAAGGATTGAACTCAAATCCTGCTGCGATGATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAACGACCAAATGTTGAAAGTCCAGCAAAAGCTGCACTTGAGGAATCTTCCCACATGTTTGAGAATCGTGGTGTCCAGATGCTAGGTCAAATAAAGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGATACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTTCCAAATGATGGGGCTGCTGAATGTGTAGACTCATACAAGCATATGTCTGTGATTGTTGTGTTAAATTCTGTGGAACTGCTGGTTGATCTTATGCGCTTTCCTGGCCAACTGTTACCACAATCAATCAAGTCAATTTTAATGACACACATTTCTGCGGCAGGAGAGAGTGACTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCTAACAGTCCTTTATATGGGGTTTCAGAGAGTGTCGAAAAGGAGGAACACCTCCAATTCCATAGAAGATTTGAAGCATCCTCAAATGTGTCAGGCCTTCCCTTGCGAAATATGATGTTACAATCAAATACCAGCCTGGACAGGAAATTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTTCGAGCACGTGGACGGTCCAAGCTTAGTGGTGACAGGACTGCATTTGGGGATTTTACTGATGACCAGGCTACATCAAGGTCAAGCTATAAGTCAGATGGTGCATCCTCATCAGAAGCTCGTAGGATACGTAGAAGAAGCATCAGCATTACACCAGAGATTGGTGACGATATTGCTAGGGCTGTACGGGCAATGAATGAAAAACTAAAGCAAAATTGTCTTCTGAGAGAACAAGGGGATGATGGTTCATTGTCCCATTCTCCAAATGATGGAACCAGCGGTGCAGATCTTCAGAAAAAAGTGTCAAATTTCCATCTTGATGGTCATCATGAAAGGTCCCCCTTATATTCGCTTCGCCGAGACAATGTAAACTCTCAGAAGGCAATGTCATTACCCTCTTCACCGCATGATTATAGAGGACAAGCTTCTGAGAGAAGTGGGCCATCAGAATATGGAATGAATGATCAACTGGAGTCGACCTGGAATAAAGTCCTCGAATCACCAATGTTCAATAATAAACCTCTGTTACCATATGAAGAGTGGAATATTGACTTCTCCGAATTGACTGTTGGAACTCGTGTTGGGATCGGGTTCTTTGGAGAAGTTTTCCGTGGCATATGGAACGGCACAGATGTTGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATTTCTATTCTCGGCCGACTCCGACATCCTAATGTCATCTTATTTCTTGGTGCCTGCACAAAGCCTCCACGCTTGTCAATGGTGACTGAATACATGGAGATGGGATCTTTGTTTTACTTGATTTATGTGAGCGGACAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTACGGATGTTGCGTGACATATGCAGGGGCTTGATGCACGTACATCGTATGAAGATTATTCACCGTGATGTGAAAAGTGCGAATTGTCTTGTGGATAAGCATTGGACAGTGAAAATATGTGATTTTGGACTTTCGAGAATTATAACAGAGTCTCCCATAAGAGATTCTTCTTCAGCTGGAACCCCAGAATGGATGGCTCCTGAACTGATTCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTGGGAGTGATAATGTGGGAGCTCTGCACCCTGAAGAGGCCATGGGAAGGCGTACCTCCAGAGAGGGTGGTTTATGCCGTTGCTAATGAGGGTTCCAGATTGGAAATTCCCGAAGGCCCGTTGGGCAGGCTGATTTCAGAGTGTTGGGCAGAACCGCATGAGCGGCCAAGTTGTGAGGAGATCCTCTCTCGCTTGGTGGACATCGAGTACTCAATATGCTGA 2448 0.4359 MEETREDSGPAEQRPSNVSWWPSDFVERFGSVSLGSQDETLNNKESPRHANQDCMSPQMASEILWRTGMLLEPIPNGFYSVVPEKRLKTLFDSIPTLDELHALGGEGFRADIIVVDAEKDRKLSMLKQLILALVKGLNSNPAAMIKKIAGLVSDFYKRPNVESPAKAALEESSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMMGFPNDGAAECVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPQSIKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESVEKEEHLQFHRRFEASSNVSGLPLRNMMLQSNTSLDRKLSLSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRARGRSKLSGDRTAFGDFTDDQATSRSSYKSDGASSSEARRIRRRSISITPEIGDDIARAVRAMNEKLKQNCLLREQGDDGSLSHSPNDGTSGADLQKKVSNFHLDGHHERSPLYSLRRDNVNSQKAMSLPSSPHDYRGQASERSGPSEYGMNDQLESTWNKVLESPMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILGRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIYVSGQKKKLSWRRRLRMLRDICRGLMHVHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITESPIRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLKRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSIC* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01582 815 SUPERFAMILY Protein kinase-like (PK-like) 533 807 IPR011009 -
Rops3g01582 815 CDD STKc_MAP3K-like 565 807 - -
Rops3g01582 815 MobiDBLite consensus disorder prediction 352 415 - -
Rops3g01582 815 MobiDBLite consensus disorder prediction 449 468 - -
Rops3g01582 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Rops3g01582 815 MobiDBLite consensus disorder prediction 497 511 - -
Rops3g01582 815 ProSiteProfiles Protein kinase domain profile. 559 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01582 815 MobiDBLite consensus disorder prediction 453 468 - -
Rops3g01582 815 ProSitePatterns Protein kinases ATP-binding region signature. 565 586 IPR017441 GO:0005524
Rops3g01582 815 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Rops3g01582 815 FunFam Serine/threonine-protein kinase isoform 1 549 637 - -
Rops3g01582 815 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 334 807 - -
Rops3g01582 815 Gene3D Phosphorylase Kinase; domain 1 552 637 - -
Rops3g01582 815 SMART serkin_6 559 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01582 815 Gene3D Transferase(Phosphotransferase) domain 1 638 813 - -
Rops3g01582 815 MobiDBLite consensus disorder prediction 390 407 - -
Rops3g01582 815 Pfam Protein tyrosine and serine/threonine kinase 560 807 IPR001245 GO:0004672|GO:0006468
Rops3g01582 815 MobiDBLite consensus disorder prediction 497 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01582 Rops-Chr3 24275297 24297384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01582 1 815 MAP Kinase Kinase Kinase AT3G58640 70.646 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Rops3g01582 PK_Tyr_Ser-Thr 1.5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01582 - - gmx:100807193 1465.67