Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01570 ATGTTGCCTCTGCTGAAGCGTGGAACATTAGATTATCTCCAAGGTCTTAAGATGCATAGAGTTAAGAGGATTGACTGGGTACTTCCAGTTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGATGATGTCGGGGTTCTGCTCCGTTCATCTCCTTCTTCCCAGGATCAACAACCTCCTACCTTTTCAAGACAAGCAAATAAAGTCGCAGGATGGGAGTTAGCATTTGTTACAGCTCCTAGTGCAAATGAGAGTGCTGCCGCGTCTAACAAACTGGTTGGAGGATTGGACAAGTTTACACTAGACGACCTCCATGATGATGCATCAGGAGTCAGACTTCATTCAGGCCGGTTGTTGTCGGTGGCCTGTTGGGATGCATGA 384 0.4714 MLPLLKRGTLDYLQGLKMHRVKRIDWVLPVGTSLTVVGEAAKDDVGVLLRSSPSSQDQQPPTFSRQANKVAGWELAFVTAPSANESAAASNKLVGGLDKFTLDDLHDDASGVRLHSGRLLSVACWDA* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01570 127 Coils Coil 127 127 - -
Rops3g01570 127 PANTHER - 6 54 IPR044231 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01570 Rops-Chr3 23933063 23946375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01570 5 53 C3H Transcription Factor Family AT1G63900 65.306 8.92e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01570 K15688 - gmx:100800734 72.0182