Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01543 ATGCCAAATGGTAGCCTTGAGAGGCATCTATATCCAAGCCATGAGTTAAGCCAGAGGTTGGATGTGGTTCAGTTAGTGAGAATATGCAGTGATGTGGCTGAGGGAATGTCCTATCTGCACCATTACTCTCCTGTGAAAGTAGTGCATTGTGATTCTGTTTACACTATGCAGGACCATGCCATCCTGAGAGCCTTATATGAAAACAATGGATCAAACTTGACCAATGGTTTCAAGACAGAGAGGGAGATGGTCAGTGTCTCACAGGAAACAGATCTGACAACTGATATGAATGTTGAAAACTCTTCAGTGGTATCAAATTTTGATATGGGTAGGGTGCCCTTTGAGAATCAGCATCATCCACCTGCTTCTGTTGCAGCAGGGGACCTTCATGGTTTGTGGATTACTAAATTCAAACAAAGGACCATTTAG 429 0.4312 MPNGSLERHLYPSHELSQRLDVVQLVRICSDVAEGMSYLHHYSPVKVVHCDSVYTMQDHAILRALYENNGSNLTNGFKTEREMVSVSQETDLTTDMNVENSSVVSNFDMGRVPFENQHHPPASVAAGDLHGLWITKFKQRTI* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01543 142 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 51 - -
Rops3g01543 142 SUPERFAMILY Protein kinase-like (PK-like) 1 51 IPR011009 -
Rops3g01543 142 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01543 Rops-Chr3 23460221 23460649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01543 57 133 NAC Transcription Factor Family AT5G61430 35.065 7.50e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01543 - - lja:Lj0g3v0218759.1 119.783