Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01540 ATGAAGGATCCAGTGGAGGATCAAGTGAAATCTAGGAGGGCTCCTCAGAAATCCTTGGAAATTAGAAGAAGGGGTAGAAGAAGAAGCCAATGCAAACAAGAGAAATTACAAGAAACAGGATTTGATTCTCAACTAAGTTCATCAACCTCTTGTAAAAGTCTTGTATTTCCTGCAAGGCCTGATTATGGCCAGCTGGGGACAAAGTGTGTGGTCAAAGCTAATCATTTCCTGGCAGATATATCAACTTCCAACTTGAGCCATTACAATGTTAAAATAACTCCTGAAATTACTTCTCGTAAAACAAGTAAAGTTATCATAGCTGAGTTAGTGACGCTTCACCAGAACACTGAATTAGGAATGAAGCTCCCTGTTTATGATGGAGGAATAAATCTTTACACTGCTGGCATGCTTCCATTTACATACGACGAGTTCACCATACAATTAAACGATGATGATAGTACCAGGGAAAGAGAATTTAAAGTGGTAATCAAGTTTGTAGCTTGTGTTAGCATGCATCAATTACGTGAGCTTCTCAGTGGGAAACAAGTGGACACCCCACAAGAGGCGCTTACTGTCATTGACATTGTCTTGAGGAGCTAG 600 0.4017 MKDPVEDQVKSRRAPQKSLEIRRRGRRRSQCKQEKLQETGFDSQLSSSTSCKSLVFPARPDYGQLGTKCVVKANHFLADISTSNLSHYNVKITPEITSRKTSKVIIAELVTLHQNTELGMKLPVYDGGINLYTAGMLPFTYDEFTIQLNDDDSTREREFKVVIKFVACVSMHQLRELLSGKQVDTPQEALTVIDIVLRS* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01540 199 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 46 198 - -
Rops3g01540 199 MobiDBLite consensus disorder prediction 1 18 - -
Rops3g01540 199 MobiDBLite consensus disorder prediction 1 47 - -
Rops3g01540 199 Pfam N-terminal domain of argonaute 67 197 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01540 Rops-Chr3 23437786 23438603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01540 56 198 Eukaryotic Initiation Factors Gene Family AT5G43810 54.362 6.43e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01540 K11593 - gmx:100808457 297.745