Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01533 ATGGAAGAGATAACTACATTTATTAAAGGTGCTATTTCTGACAATCAATGCTTGGGGCGTTGTCTCTACATTCATGGTGTTCTGAGAATTGGCAAGACAATGAGTATACTAGCAGTGATGAGCAGCTTGAGGTCAGAAGTTGATGCAGGAAACATCAAACCCTACTGTTTTGTGGAGATTAATGGCCTAAAATTGGCATCACCAGAGAATATTTATAGGGTAAAGTTCCCGAATTCTATACTGTTTTTTGCTTTGTATAACCATATTCCTTTGTTATTATCTTATAGTTCTGATATTCTTTCAGGTCATATATGGGGCATTAAATGGACAGAGTCAGCTGTAAAAAAGGCTCTCCACTTGCTAAACAAGAGGTTTGTAGAAGGAAAGAAAAGTGGAGAAGAGGCTGACTGGGCATGTATTTTGCTAATTGATGAACTTGATCTTCTTGTGACCAGAAACCAGTTGGTTTTGTACAATTTTCTGGACTGGCCTACCAAGCCACATTCCAAGCTAATTGTGATTGGGAAGACAGAGCTCATCTCCGATGGCTATGTGGATTGGGGAAAGAAAGCTATAGAGTTTGTTTCAACAAAGGCTCTCACAAGGAGAATCCATTATGGAAAATTTGTAGCAGAGGCAAATTTTCAAGCTTCTCCTCATGCATATAAAGCTGCCATTATAGCACAGGTCAAGGAGGTCTGGAACCTTGAAACATTGCAATGTTTACTAACACTAACAGAGCACACATCTGTTGTGATGTCTGTTCCTTGTTGGGATCAGTTCCTATTATCTTGTTTATTGGACAAAACAGTTAAGGAAAAGGTTAATTTGTATAGCGGCTCACATGTAAGGTTTTATTTGACAATGCAGTTGGCAATGACGATTTCGTGTCTCTACTATAAGCAAATTCCTAATCCTGATGACTACTCTTCGACTTGCAAAGCTATGGAGACCCAGAAGCAGCAGATACTGTGTACCTTCGAAGTAAATATTAGTTCTAGCAAAATTCCATTAAATTGTTTGGAGCATTAA 1032 0.3857 MEEITTFIKGAISDNQCLGRCLYIHGVLRIGKTMSILAVMSSLRSEVDAGNIKPYCFVEINGLKLASPENIYRVKFPNSILFFALYNHIPLLLSYSSDILSGHIWGIKWTESAVKKALHLLNKRFVEGKKSGEEADWACILLIDELDLLVTRNQLVLYNFLDWPTKPHSKLIVIGKTELISDGYVDWGKKAIEFVSTKALTRRIHYGKFVAEANFQASPHAYKAAIIAQVKEVWNLETLQCLLTLTEHTSVVMSVPCWDQFLLSCLLDKTVKEKVNLYSGSHVRFYLTMQLAMTISCLYYKQIPNPDDYSSTCKAMETQKQQILCTFEVNISSSKIPLNCLEH* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01533 343 SUPERFAMILY WD40 repeat-like 233 272 IPR036322 GO:0005515
Rops3g01533 343 Pfam ATPase family associated with various cellular activities (AAA) 23 179 IPR003959 GO:0005524|GO:0016887
Rops3g01533 343 SUPERFAMILY Chorismate mutase II 197 229 IPR036263 GO:0046417
Rops3g01533 343 Gene3D - 1 181 IPR027417 -
Rops3g01533 343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 178 IPR027417 -
Rops3g01533 343 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 191 255 IPR037039 GO:0004106|GO:0009073
Rops3g01533 343 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01533 Rops-Chr3 23239922 23248915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01533 1 209 Core DNA Replication Machinery Family AT4G14700 53.110 1.54e-61 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01533 K02603 - gmx:100798547 225.328