Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01522 ATGGAGTCGCATTGCTTTCTATGTTTCCACTGCACATGTTTTCTTCTGTTCGCTTCTGCCACATATTGCCTTTCACACCCTTCTTCTCTCCTTGGCGTTCACCCTCTAGATGAGAAATATTACAGCTCTGAGGTGATCAAGTGCAAGGATGAATCGAAATCTTTCTCCAGAGACCGTCTCAATGACAATTTCTGTGACTGCCCTGATGGCACTGATGAACCTGGAACTTCAGCTTGCCCAACAGGAAAGTTTTATTGCAGAAACCTAGGAAGTAAGCCACAGTTTATAGTTTCTTCCCATGTTAATGACCGTTTTTGTGATTGTTGTGATGGGAGTGATGAATATGATGGAAGCATTCATTGCCCCAACACATGTGTCATGGGTGGGAATGCTGAGTACATGTTTGGCAATTACAATTCAAAAGAAAGTAATCTGGGCTTTTCTGCTGAAAAAGAAACCAAAAATGGAGTCAAGTCAGAGGAATCAGTTCGAAACCTTACTGGTTTGAAGTTGGCAATTATTCTACAAGTGGTTCTGGTTATTTTTCTGGTACTTCTATGGAGTTTTCGTCGCCACACCAGATCTAGAAAGAGGCGTTACCGATGA 606 0.4208 MESHCFLCFHCTCFLLFASATYCLSHPSSLLGVHPLDEKYYSSEVIKCKDESKSFSRDRLNDNFCDCPDGTDEPGTSACPTGKFYCRNLGSKPQFIVSSHVNDRFCDCCDGSDEYDGSIHCPNTCVMGGNAEYMFGNYNSKESNLGFSAEKETKNGVKSEESVRNLTGLKLAIILQVVLVIFLVLLWSFRRHTRSRKRRYR* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01522 201 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 12 165 IPR039794 -
Rops3g01522 201 Pfam Glucosidase II beta subunit-like 22 134 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01522 Rops-Chr3 22970022 22973884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01522 30 131 Calmodulin-binding Proteins AT5G56360 67.961 1.10e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01522 - - tpra:123907740 290.812