Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01519 ATGTCGCTCTCATGCTTGATATGCTTCCTAGGAACAATAGAAGCTGTGGGTATTGCAATTGCATTTGAGCATAATCCTCGTGCATGGGCCATCGGTTGGGACGTGAGGCTTTTCGCTCCACTGTATGCTGGAGTGGTAACCACAGGGATTATGTTCTACGTGCAAAGGGTAGTGATACGAACCAGAGGACCTGTATTTGTTACAGCATTTAACCCTCTGCGTGTCATCATTGTGATTATCTTGGCCTTCCCCATCCTGCACGATACACACTACCTCGGAAGTGTTATTGGAAGCGTTGTAGTTTTTATTGGCGTGTACATTGTAATTTGGGGCAAAGGCAAAGACCGTGATGGCCAGAAGTTGGCAACTGAGACCAAAGGCACAGCTACTGTACCCGAATCAAACTCGCCATCTGACAAGTCCCAGACCCAAATTAGTCAAATGAGGAGTCTATCAATAGTTACAAAATAA 471 0.4565 MSLSCLICFLGTIEAVGIAIAFEHNPRAWAIGWDVRLFAPLYAGVVTTGIMFYVQRVVIRTRGPVFVTAFNPLRVIIVIILAFPILHDTHYLGSVIGSVVVFIGVYIVIWGKGKDRDGQKLATETKGTATVPESNSPSDKSQTQISQMRSLSIVTK* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01519 156 PANTHER WAT1-RELATED PROTEIN 1 123 IPR030184 GO:0016020|GO:0022857
Rops3g01519 156 MobiDBLite consensus disorder prediction 121 156 - -
Rops3g01519 156 MobiDBLite consensus disorder prediction 123 156 - -
Rops3g01519 156 Pfam EamA-like transporter family 5 109 IPR000620 GO:0016020
Rops3g01519 156 SUPERFAMILY Multidrug resistance efflux transporter EmrE 29 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01519 Rops-Chr3 22905371 22906609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01519 1 153 Nodulin-like Gene Family AT5G07050 41.139 1.62e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01519 - - pvy:116114273 138.658