Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01512 ATGCGGAACCTTTCTCTTTTCTGCGACGTAGTTTTGTACGCCATTGCTTCCTTTCTCCAATTTGAGGCTAAAGGTATGATGGGAGAAAATTCCAAGAGCAAATGTGGATCTTCTGCTCATCAATCCATGAAAGAGAAGGAAAAACACTTGGTTGAAAAGATTCAAGGGATTTTCACCAATCTTCAGTCTGCAAGAAAGGAAAGCAGGGCTAATGACATTGTGATCTTTGAGGAGCAGATGAATCAGTTGCTTCGAGAGTGGAAGGCAGAATTGGAGTCTCCAGCAACCTCCTTAGCTGAAGGAAGCTTTGATTCGTTTACTGGGGAACTAGCCCAACTATTGCAAGTAATTGAGGAGAAAGATGATGCAACAAGTCCATTAACAAAACCCATGCCATTGAAGACTGAGCTCCATCCAAATAACATTAGTGATAGAAATTATCAGTTTCTACAGGAGAAGTGTTTTGATGATAACCAACCACTAGATCATCATACTTTTGAAGGCTCTGCTTCAACTCTGTACAACAATGCCTTTAATAACACAGATATGACTCAGTTGGATTATCATCCATTTGGTTTAAATCAAGATTTGGATCACAATGCAGTAGGCCACAACTCTGATTTGATTGGTCAGTTTGATTTATACCAGGACCTCGGGCACAACACACAAATAAAAAATTCTGATTCAACTCAATTTAGTTTTGAAGAAGGCTTTGATTGTAGCCAATTATTTGGAGATGATAACGCCATGCAGTGGGGAGAGAATATCATGCCTAACATTCTTCCAAGTATCCGTCCTTCACCTTCTGCTTTTTTAGCCCCAAAATGTGCACTATGGGACTGTTTCAGACCTGCTCAAGGGCTAGTATGGTGCCAGGACTACTGCAGTAGTGGCCATGAGCTTTTGGCAAACAATGAGGGTCTTCCTGGCATGACTCCAATTTTGCGACCTGGGGGCATTGGTGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCAAAGACACAAGGGAAGGAAGTGGGCATCCCTAAATGCGAAGGTGCTGCTTCGACTAAATCCCCTTGGAATGCTCCAGAGTTCTTTGATCTTTCGTTTCTCGAGGGTGAAACTGTGAGGGAGTGGCTCTTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAACAGAAAACAGAGATCACTCCCAGATTACATTGGGCGTGGTTGGCATGAATCAAGGAAGCAAGTGATGAAGGAACATGGGGGACAAAAGAGGTCCTATTACATGGACCCCCAGCCTCTTAGTTATCTAGAGTGGCATTTGTATGAGTATGAGATCAATAACCATGATGGTTGCGCATTATACAGACTAGAACTAAAGCTTGTGGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACTAAGGAATCTCTTACTGATTTACAAAACAAGATGGGAAAGCTAACTGCTGCTGTTCCTTCATCAGATGATGGACACCCTGACAAGGGGAAAACAAAGGCCAAGTCTGAGAATGTTGACTCTCCTGAAAAGTGA 1530 0.4229 MRNLSLFCDVVLYAIASFLQFEAKGMMGENSKSKCGSSAHQSMKEKEKHLVEKIQGIFTNLQSARKESRANDIVIFEEQMNQLLREWKAELESPATSLAEGSFDSFTGELAQLLQVIEEKDDATSPLTKPMPLKTELHPNNISDRNYQFLQEKCFDDNQPLDHHTFEGSASTLYNNAFNNTDMTQLDYHPFGLNQDLDHNAVGHNSDLIGQFDLYQDLGHNTQIKNSDSTQFSFEEGFDCSQLFGDDNAMQWGENIMPNILPSIRPSPSAFLAPKCALWDCFRPAQGLVWCQDYCSSGHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPKCEGAASTKSPWNAPEFFDLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYIGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVDKKKSPKGKVTKESLTDLQNKMGKLTAAVPSSDDGHPDKGKTKAKSENVDSPEK* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01512 509 MobiDBLite consensus disorder prediction 461 509 - -
Rops3g01512 509 PANTHER TRANSCRIPTION FACTOR VOZ1 27 503 IPR039277 GO:0006355|GO:0048578
Rops3g01512 509 MobiDBLite consensus disorder prediction 489 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01512 Rops-Chr3 22738205 22747813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01512 26 485 VOZ-9 Transcription Factor Family AT1G28520 53.419 2.13e-159 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Rops3g01512 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01512 - - psat:127101646 839.336