Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01509 ATGGACCTAAGTTGTGAGGTTCCTACCACAAATCAAGCACGTACTTTAAGTAGCAAAATCATGGAATCCCACGGTGAAGATCATGTTCCCAAACTGCTTCGAGCTCAAACCCAGGTATTCAATCATATTTTGAGTTTCATAAAATCTATGTCCCTTAAATGTGCAATTGACTTGTGCATACCAGATATCATTCACAAGTATGGCCAACCCATGCCACTCTCACAACTCATTGCTTCACTATCAATCCACCCCTCCAAAACCCACTTCATCCACCGCTTGATGCGAGTTTTGACTCATTCTGGATTCTTTGCTCAACAGAATGTCACAGAAAATGAGTTAGAAGTGAGGTATAAGCTAACTGATGCATCTATGCTACTTCTTAAGGACCATCCCTTGAGTATGACACCTTTTTTGTATCTTGCTCTTGATCCGATTGTCACAAAGCCGTATTATCAGTTTTCCACTTGGTTAAAAAATGAAGATCCTACACCGTTCCACAACGAATATGGGATGACACTTTGGGATTATGCTGGTCATGACCCCACAATCAATCGCCTTTTCAATGATGCCATGGCAGGTGATACTCAATTGGTTTCATTTGTGATGATTGAGAAGTGCAAGGGAGTGTTTGAGGGATTGAAGTTATTGGTTGATGTTGGAGGAGGAACAGGTTCTTTGACAAAGGCCATTGCTAAATCATTTCCAAAGTTGGAGTGCATTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGCAAGGAACAGAGAACATAAAATATGTTGGAGGGGACATGTTTGAGGCAATTCCTTCTGCTGATTCCATTATGTTGAAGTGGATATTGCATAACTGGAACGATGAGGAATGTGTGAAAATACTGAGTAAATGCAAGGAGGCGATAACTAGCCACGACAAAGATGGGAAGATTATTATTATAGACATAGTGTTGGAGAATGAGAAGGCAGACGATAAATTAATTGAAACGCAGTTGTTCTTTGATATGCAGATGATGGTGTATTTAAGTGGAAAACAAAGAAATGAGAAAGAGTGGGCCAACCTGGTTTTCTCTGCTGGTTTTAGCAACTATAAGATAACTCCAGTTCTGGGTTTTAGGTCTCTCATTGAGGTTTATCCATAA 1134 0.4021 MDLSCEVPTTNQARTLSSKIMESHGEDHVPKLLRAQTQVFNHILSFIKSMSLKCAIDLCIPDIIHKYGQPMPLSQLIASLSIHPSKTHFIHRLMRVLTHSGFFAQQNVTENELEVRYKLTDASMLLLKDHPLSMTPFLYLALDPIVTKPYYQFSTWLKNEDPTPFHNEYGMTLWDYAGHDPTINRLFNDAMAGDTQLVSFVMIEKCKGVFEGLKLLVDVGGGTGSLTKAIAKSFPKLECIVFDLPHVVAGLQGTENIKYVGGDMFEAIPSADSIMLKWILHNWNDEECVKILSKCKEAITSHDKDGKIIIIDIVLENEKADDKLIETQLFFDMQMMVYLSGKQRNEKEWANLVFSAGFSNYKITPVLGFRSLIEVYP* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01509 377 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 376 IPR029063 -
Rops3g01509 377 SUPERFAMILY "Winged helix" DNA-binding domain 31 131 IPR036390 -
Rops3g01509 377 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 40 377 IPR016461 GO:0008168
Rops3g01509 377 PANTHER O-METHYLTRANSFERASE 33 362 IPR016461 GO:0008168
Rops3g01509 377 PIRSF O-mtase 16 377 IPR016461 GO:0008168
Rops3g01509 377 FunFam O-methyltransferase ZRP4 128 377 - -
Rops3g01509 377 Gene3D Vaccinia Virus protein VP39 127 377 IPR029063 -
Rops3g01509 377 Pfam Dimerisation domain 50 98 IPR012967 GO:0046983
Rops3g01509 377 Gene3D - 21 126 IPR036388 -
Rops3g01509 377 FunFam Coniferyl alcohol 9-O-methyltransferase 22 126 - -
Rops3g01509 377 Pfam O-methyltransferase domain 150 359 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01509 Rops-Chr3 22672600 22674701 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01509 50 363 Monolignol Biosynthesis Gene Families AT5G54160 33.750 4.36e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01509 - K16040 gmx:100781008 537.724