Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01499 ATGAATGGAGGCCCGTTTGTGTATGTCACTTGCATGAGGACGGCTGCCTCATTTGTTACATTCGAAAAGTGGCACAAGCTGAACGTTGAGGAGCACTCATGGTCGTGTGGCCATTTGCATGGCATGTGCCGACAAGGATTTAGTGTCGTGGAATACCATGATGGGCTACGGGGCCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGATCTAGTTCATCCAAACCGTGTCAAACTTGTAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGAAGCCTCGAAAACTATTTATTTAGGAGATCCCTGCCTTTTCCATGGTCCAATAGGATGAACATTGCACTAGGAGCTGCTAAGGGTCTCGTTTTCTTCATGAAGAAGCTGAACGACCAGTAA 420 0.4595 MNGGPFVYVTCMRTAASFVTFEKWHKLNVEEHSWSCGHLHGMCRQGFSVVEYHDGLRGHKEWLAEVNFLGDLVHPNRVKLVGYCIEDDQRLLVYEFMPRGSLENYLFRRSLPFPWSNRMNIALGAAKGLVFFMKKLNDQ* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01499 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01499 139 PANTHER OS01G0588500 PROTEIN-RELATED 50 133 - -
Rops3g01499 139 SUPERFAMILY Protein kinase-like (PK-like) 56 131 IPR011009 -
Rops3g01499 139 Pfam Protein tyrosine and serine/threonine kinase 59 134 IPR001245 GO:0004672|GO:0006468
Rops3g01499 139 Gene3D Transferase(Phosphotransferase) domain 1 38 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01499 Rops-Chr3 22464924 22465706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01499 54 137 Glycoside Hydrolase AT3G07070 49.425 1.52e-20 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops3g01499 PK_Tyr_Ser-Thr 3.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01499 - - egt:105974701 153.68