Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g01495 | ATGGACCTAAGTTGTGAGGTTCCTACCACAAATCAAGCACGTACTTTAAGTAGCAAAATCATGGAATTCCACAGTGAAGATCATGTTCCCAAACTGCTTCGAGCTCAAACCCATGTATTCAATCATATTTTGAGTTTCGTAAAATCTATGTCCCTTAAATGTGCAATTGACTTGTGCATACCAGATATCATCCACAAGTATGACCAACCCATGCCACTCTCACAACTCATTGCTTCACTATCAATCCACCCCTCCAAAACCCACTTCATCCACCGCTTGATGCGAATTTTGACTCATTCTGGTTTCTTCTCTCAACAGAATGTCACTGAAAATGAGTTAGAAGTGAGGTATAAACTAACTGATGCATCTATGCTGCTACTTAAGGACCATCCCTTGAGTATGACACCTTATTTGTATCTTGCTCTTGATCCGATGGGCACAAAGCCGTATTATCATTTTTCCACTTGGTTAAAAAATGAAGATCCTACACCGTTCCACAATGTATATGGGATGACATTTTGGGATTATGCTGGTCATGACCCCACACTCAATCGCCTTTTCAATGATGCCATGGCAGGTGATACTCAATTGGTTTCATTTGTGATGATTGAGAAGTGCAAGGGAGTGTTTGAGGGATTGAAGTCATTGGTTGATGTTGGAGGAGGAACAGGTTCTTTGACAAAGGCCATTGCTAAATCATTTCCAAAGTTGGAGTGCATTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGCAAGGAACAGAGAACATAAAATATGTTGGAGGGGACATGTTTGAGGCAATTCCTTCTGCTGATTCCATTATGTTGAAGTGGATATTGCATAACTGGAACGATGAGGAATGTGTGAAAATACTGAGTAAATGCAAGGAGGCAATAACTAGCCACGACAAAGATGGGAAGATGATGATGTGTGTCAGTGGAAAACAAAGAAATGAGAAAGAGTGGGCCAACCTGGTTTTCTCTGCTGGTTTTAGCAACTATAAGATAACTTCAGTTCTGGGTTTTAGGTCTCTCATTGAGGTTTATCCATAA | 1053 | 0.4065 | MDLSCEVPTTNQARTLSSKIMEFHSEDHVPKLLRAQTHVFNHILSFVKSMSLKCAIDLCIPDIIHKYDQPMPLSQLIASLSIHPSKTHFIHRLMRILTHSGFFSQQNVTENELEVRYKLTDASMLLLKDHPLSMTPYLYLALDPMGTKPYYHFSTWLKNEDPTPFHNVYGMTFWDYAGHDPTLNRLFNDAMAGDTQLVSFVMIEKCKGVFEGLKSLVDVGGGTGSLTKAIAKSFPKLECIVFDLPHVVAGLQGTENIKYVGGDMFEAIPSADSIMLKWILHNWNDEECVKILSKCKEAITSHDKDGKMMMCVSGKQRNEKEWANLVFSAGFSNYKITSVLGFRSLIEVYP* | 351 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g01495 | 350 | FunFam | Coniferyl alcohol 9-O-methyltransferase | 22 | 126 | - | - | |
Rops3g01495 | 350 | Gene3D | Vaccinia Virus protein VP39 | 127 | 350 | IPR029063 | - | |
Rops3g01495 | 350 | Pfam | Dimerisation domain | 50 | 98 | IPR012967 | GO:0046983 | |
Rops3g01495 | 350 | SUPERFAMILY | "Winged helix" DNA-binding domain | 31 | 131 | IPR036390 | - | |
Rops3g01495 | 350 | Gene3D | - | 22 | 126 | IPR036388 | - | |
Rops3g01495 | 350 | PANTHER | O-METHYLTRANSFERASE | 33 | 335 | IPR016461 | GO:0008168 | |
Rops3g01495 | 350 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 131 | 349 | IPR029063 | - | |
Rops3g01495 | 350 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 40 | 350 | IPR016461 | GO:0008168 | |
Rops3g01495 | 350 | Pfam | O-methyltransferase domain | 150 | 302 | IPR001077 | GO:0008171 | |
Rops3g01495 | 350 | PIRSF | O-mtase | 16 | 308 | IPR016461 | GO:0008168 | |
Rops3g01495 | 350 | PIRSF | O-mtase | 302 | 350 | IPR016461 | GO:0008168 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g01495 | Rops-Chr3 | 22396196 | 22398826 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g01495 | 47 | 348 | Monolignol Biosynthesis Gene Families | AT5G54160 | 31.737 | 8.11e-50 | 169 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g01495 | - | K16040 | gmx:100807238 | 481.1 |