Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01495 ATGGACCTAAGTTGTGAGGTTCCTACCACAAATCAAGCACGTACTTTAAGTAGCAAAATCATGGAATTCCACAGTGAAGATCATGTTCCCAAACTGCTTCGAGCTCAAACCCATGTATTCAATCATATTTTGAGTTTCGTAAAATCTATGTCCCTTAAATGTGCAATTGACTTGTGCATACCAGATATCATCCACAAGTATGACCAACCCATGCCACTCTCACAACTCATTGCTTCACTATCAATCCACCCCTCCAAAACCCACTTCATCCACCGCTTGATGCGAATTTTGACTCATTCTGGTTTCTTCTCTCAACAGAATGTCACTGAAAATGAGTTAGAAGTGAGGTATAAACTAACTGATGCATCTATGCTGCTACTTAAGGACCATCCCTTGAGTATGACACCTTATTTGTATCTTGCTCTTGATCCGATGGGCACAAAGCCGTATTATCATTTTTCCACTTGGTTAAAAAATGAAGATCCTACACCGTTCCACAATGTATATGGGATGACATTTTGGGATTATGCTGGTCATGACCCCACACTCAATCGCCTTTTCAATGATGCCATGGCAGGTGATACTCAATTGGTTTCATTTGTGATGATTGAGAAGTGCAAGGGAGTGTTTGAGGGATTGAAGTCATTGGTTGATGTTGGAGGAGGAACAGGTTCTTTGACAAAGGCCATTGCTAAATCATTTCCAAAGTTGGAGTGCATTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGCAAGGAACAGAGAACATAAAATATGTTGGAGGGGACATGTTTGAGGCAATTCCTTCTGCTGATTCCATTATGTTGAAGTGGATATTGCATAACTGGAACGATGAGGAATGTGTGAAAATACTGAGTAAATGCAAGGAGGCAATAACTAGCCACGACAAAGATGGGAAGATGATGATGTGTGTCAGTGGAAAACAAAGAAATGAGAAAGAGTGGGCCAACCTGGTTTTCTCTGCTGGTTTTAGCAACTATAAGATAACTTCAGTTCTGGGTTTTAGGTCTCTCATTGAGGTTTATCCATAA 1053 0.4065 MDLSCEVPTTNQARTLSSKIMEFHSEDHVPKLLRAQTHVFNHILSFVKSMSLKCAIDLCIPDIIHKYDQPMPLSQLIASLSIHPSKTHFIHRLMRILTHSGFFSQQNVTENELEVRYKLTDASMLLLKDHPLSMTPYLYLALDPMGTKPYYHFSTWLKNEDPTPFHNVYGMTFWDYAGHDPTLNRLFNDAMAGDTQLVSFVMIEKCKGVFEGLKSLVDVGGGTGSLTKAIAKSFPKLECIVFDLPHVVAGLQGTENIKYVGGDMFEAIPSADSIMLKWILHNWNDEECVKILSKCKEAITSHDKDGKMMMCVSGKQRNEKEWANLVFSAGFSNYKITSVLGFRSLIEVYP* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01495 350 FunFam Coniferyl alcohol 9-O-methyltransferase 22 126 - -
Rops3g01495 350 Gene3D Vaccinia Virus protein VP39 127 350 IPR029063 -
Rops3g01495 350 Pfam Dimerisation domain 50 98 IPR012967 GO:0046983
Rops3g01495 350 SUPERFAMILY "Winged helix" DNA-binding domain 31 131 IPR036390 -
Rops3g01495 350 Gene3D - 22 126 IPR036388 -
Rops3g01495 350 PANTHER O-METHYLTRANSFERASE 33 335 IPR016461 GO:0008168
Rops3g01495 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 349 IPR029063 -
Rops3g01495 350 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 40 350 IPR016461 GO:0008168
Rops3g01495 350 Pfam O-methyltransferase domain 150 302 IPR001077 GO:0008171
Rops3g01495 350 PIRSF O-mtase 16 308 IPR016461 GO:0008168
Rops3g01495 350 PIRSF O-mtase 302 350 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01495 Rops-Chr3 22396196 22398826 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01495 47 348 Monolignol Biosynthesis Gene Families AT5G54160 31.737 8.11e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01495 - K16040 gmx:100807238 481.1