Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01487 ATGCCAATTTTGACTCATTCCGGTTTCTTCTCTCAGCAAAATGGCACTGAAAATGAGCTAGAAGTGAGGTATGTGCTCACTGATGCATCTAGACTACTACTTAAGGACCATCCTTTGAGTATGACATCTCTCTTGCATATGCTTGATCCAACTTCGATTAAGCCATGGTATCAACTTTGTACTTGGTTCAAAAGTGAAGATCCTACACCATTTTACACAGAATATAAAATGACATTTTGGGATGTTGGCCATGAGCCCAAACATGTTCATTTATTCAATGATGTCATGACAAGTGATGCTCAATTAGTTTCTAGTGTGGTGATTGAGAAGTGCAAGGGTGTGTTTGAGGGATTGAAGTCATTGGTTGATGTTGGTGGAGGCACAGGGATTGTGGCAAAAGCCATTGCAGAATCATTCCCTCAGCTCCAATGCGTTGTATTAGATCTTCCACATGTTGTTGCTGGCTTGCATGGAAGTGAAAACTTAAAATATGTTGGTGGGAACATGCTTGAAGAAATTCCTCCGGCTGATGCTGTTTTGTTGAAGAAATGCAAGGCAGCAATTACTAACAAAGGCAAAGAAGGAAAGGTGGTTATCATAGACATGGTGATGGAGAACAAGAAGGGAGATGATGAATCTGTGGAAACACAGCTCTTCTGTGACATGCTGATGATGGTGTATGCCTCAGGAAAGGAGAGAAATGGGAAAGAATGGGCCAAGTTGTTTTCCTTAGCTGGTTTCACTGACTACAAGATAGCTTCAATTCTGGGTTTAAGGTCACTCATTGAGGTTTACCCATAG 801 0.4132 MPILTHSGFFSQQNGTENELEVRYVLTDASRLLLKDHPLSMTSLLHMLDPTSIKPWYQLCTWFKSEDPTPFYTEYKMTFWDVGHEPKHVHLFNDVMTSDAQLVSSVVIEKCKGVFEGLKSLVDVGGGTGIVAKAIAESFPQLQCVVLDLPHVVAGLHGSENLKYVGGNMLEEIPPADAVLLKKCKAAITNKGKEGKVVIIDMVMENKKGDDESVETQLFCDMLMMVYASGKERNGKEWAKLFSLAGFTDYKIASILGLRSLIEVYP* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01487 266 Gene3D Vaccinia Virus protein VP39 35 266 IPR029063 -
Rops3g01487 266 PANTHER O-METHYLTRANSFERASE 1 251 IPR016461 GO:0008168
Rops3g01487 266 Pfam O-methyltransferase domain 56 247 IPR001077 GO:0008171
Rops3g01487 266 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 37 265 IPR029063 -
Rops3g01487 266 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 266 IPR016461 GO:0008168
Rops3g01487 266 FunFam O-methyltransferase ZRP4 35 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01487 Rops-Chr3 22223920 22225745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01487 11 264 Monolignol Biosynthesis Gene Families AT5G54160 28.044 4.36e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01487 - K16040 gmx:100807238 363.999