Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g01468 | ATGTTCACCGTCTCTGACAGCAGGACCAAGAGTCGCGTTTTTGGGCTCCCTAACCATTCTCTTCGACATGATCTACACACTGAGGGGGGTCTCAAATCCCTTGATGAATTCCTCTCTGGGAAGACCTATATTTCTGGGGATCAATTGACAAAGGATGATATCAAAGTGTATGCCGCTGTTTTGGAAAAACCAGGTGACTCTTTTCCCAATGCTGCCAAGTGGTACGATGTTGTCTCTTCACAGCTTGCTGCAAGCTTCCCTGGGAATGCTCAAGGGGTAAATTTCAGTCGCAATGCTGCTCTGCTGCTCACCGCACTGACCAAAGCGGATGCTGCTGTGGAAGATGATGATCTTGATCTCTTTGGTGATGAAACAGAGGAAAGGGAGGCTGCTAAAAAGACTGCCAAGAAGAAAGAAAGTGGCAAGTCTTCCGTTCTGCTTGATGTTAAGCCTTGGGACGACGAGACAGACATGAAGAAGCTGGAAGAGGCGGTTCGTAGCGTTCAGATGCCTGGTTTGTTATGGGGAGCATCCAAACTGGTTCCAGTGGGATATGGGATCAAGAAGCTGCAGATCATGATGGCTATTGTTGATGACCTTGTTTCTGTGGACACTCTCATTGAGGAACACCTGACAGTTGAGCCATGCAATGAATATATCCAAAGCTGTGACATTGTTGCACCCAACAAATTCGTGGGAGGGAGCCACGACAACATCCACTGGTGCTAA | 729 | 0.4787 | MFTVSDSRTKSRVFGLPNHSLRHDLHTEGGLKSLDEFLSGKTYISGDQLTKDDIKVYAAVLEKPGDSFPNAAKWYDVVSSQLAASFPGNAQGVNFSRNAALLLTALTKADAAVEDDDLDLFGDETEEREAAKKTAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMPGLLWGASKLVPVGYGIKKLQIMMAIVDDLVSVDTLIEEHLTVEPCNEYIQSCDIVAPNKFVGGSHDNIHWC* | 243 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g01468 | 242 | SMART | EF1_GNE_2 | 142 | 231 | IPR014038 | GO:0003746|GO:0006414 | |
Rops3g01468 | 242 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 26 | 230 | - | - | |
Rops3g01468 | 242 | SUPERFAMILY | GST C-terminal domain-like | 27 | 83 | IPR036282 | - | |
Rops3g01468 | 242 | CDD | EF1B | 140 | 231 | IPR014038 | GO:0003746|GO:0006414 | |
Rops3g01468 | 242 | Gene3D | - | 135 | 231 | IPR014717 | - | |
Rops3g01468 | 242 | Gene3D | - | 17 | 91 | - | - | |
Rops3g01468 | 242 | SUPERFAMILY | eEF-1beta-like | 139 | 230 | IPR036219 | - | |
Rops3g01468 | 242 | Pfam | EF-1 guanine nucleotide exchange domain | 144 | 230 | IPR014038 | GO:0003746|GO:0006414 | |
Rops3g01468 | 242 | FunFam | Elongation factor 1-beta 1 like | 136 | 231 | - | - | |
Rops3g01468 | 242 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 114 | 122 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g01468 | Rops-Chr3 | 21824656 | 21825384 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g01468 | 24 | 231 | Eukaryotic Initiation Factors Gene Family | AT5G12110 | 69.820 | 1.91e-92 | 270 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g01468 | K03232 | - | gmx:100500082 | 317.39 |