Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01447 ATGGATACAATCGTATGTCATCGTAGGTATACTATACGAAATACCCGTTTTGCAAAGGTATATATACCCCCGGTGCATCATCATCTTTTATTTAGTGGGAACGACTGCACTGAATCACCACCCTCTCGTCTTCAACGAATTGGTCGTAACGAATTCGAACCAGAATGCAGAGCTAAGATAAAAGTCTCTGCAACAAAAAAGGCATGGGATGATTACAATAGACATCTTTCAGACAAGAAGGCAAATGAGAAGGAAGCTTGGGTAGTCAGGAAGGGTGTCAAGAAACCTATCCAAGCCCAGGACATTCATGTAGGCAGGACTTTGCTATATAGAGGTAATTATTGTGTGAAGACACAGGTCATACCTTCTGCTTGCATGGGAATTAATGTTGAACTATTACACAAAATCAAGGGTGTAATTGAGTGCCCTAGTCCTGATAAAGACATCAGAAGATTTGATGCAAACATGCGGCTGTTCCCCCCATTTATTGATAATGATACGTGCCTATTAACCATAAAAAATACAATTCTTCAGTCATGTTGCTTGCGAAACACTGAGTGGGCATGTGGAGTGGCTGTATAA 582 0.4089 MDTIVCHRRYTIRNTRFAKVYIPPVHHHLLFSGNDCTESPPSRLQRIGRNEFEPECRAKIKVSATKKAWDDYNRHLSDKKANEKEAWVVRKGVKKPIQAQDIHVGRTLLYRGNYCVKTQVIPSACMGINVELLHKIKGVIECPSPDKDIRRFDANMRLFPPFIDNDTCLLTIKNTILQSCCLRNTEWACGVAV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01447 193 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 130 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01447 Rops-Chr3 21542679 21546161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01447 62 193 Primary Pumps ATPases AT5G44240 62.733 1.82e-62 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01447 K01530 - gmx:100786505 213.386