Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01444 ATGCAACAAACAATAAGCGAGGACCTGGGACAAGTTGAGTACATTCTAACTGATAAAACAGGCACCCTGACTGAGAATAAGATGATATTTAAAAGATGTTGTATTGGTGGCATTTTCTATGGAAATGAGAATGGAGATGCAGTGAAAGCCAGCACTAATACTTCGGGTATCCAGAAAGACTCTAGAAGTAGCAGTTCCAATAATTTCCTTAATTCAAGCACTATTTGGAGTCTTAGTTTTCTCATTAATACATATGTAGAGCTTCTCAATGTCGTTTCAACTGATTCTCCTGAGGTTGTACAATTTCTTACAGTTATGGCACTATGTAATACTGTTGTGCCTACGCAAAGCAAAACTAGAGATATATTGTATAAGGCACAGTCTCAGGATGAGGATGCTCTTGTTCGTGCTGCTGCTCAACTGCATATGGTTTTCTTCAATAAGAATGGAAACATTGTTGAAGTCAAGTTTAACTCTTCAGTACTTCAGTATGAAGTCCTGGAAACTCTAGAGTTCACCTCTAATAGGAAAAGAATGTCGGTAGTGGTGAAAGATTGTCAAAATGGAAAGATCCTTCTATTGTCAAAAGGAGCAGATGAGGCAATTCTTCCATATGCTCGCATTGGGCAGCAAACCCGAAACTTCATTGAAGCTGTGGAGCAATATGCTCACTTGGGACTGTGTACACTATGTTTGGCTTGGCGCGATTTAAAGGAAGATGAATATCAAGAATGGTCTTTTATGTTTAAAGATGCCAGTAGTGCCTTGGTTGATAGGGAGTGGAGAGTTGCTGAGGTCTGCCAAAGATTAGAACATGATTTTGATGTTCTTGGTGTAACAACAATAGAGGATCGCTTACAAGAGAGTATTTGCCATATTTTCACATAG 888 0.3896 MQQTISEDLGQVEYILTDKTGTLTENKMIFKRCCIGGIFYGNENGDAVKASTNTSGIQKDSRSSSSNNFLNSSTIWSLSFLINTYVELLNVVSTDSPEVVQFLTVMALCNTVVPTQSKTRDILYKAQSQDEDALVRAAAQLHMVFFNKNGNIVEVKFNSSVLQYEVLETLEFTSNRKRMSVVVKDCQNGKILLLSKGADEAILPYARIGQQTRNFIEAVEQYAHLGLCTLCLAWRDLKEDEYQEWSFMFKDASSALVDREWRVAEVCQRLEHDFDVLGVTTIEDRLQESICHIFT* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01444 295 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 23 242 IPR023299 GO:0000166
Rops3g01444 295 Pfam Cation transport ATPase (P-type) 107 204 - -
Rops3g01444 295 Gene3D - 12 284 IPR023299 GO:0000166
Rops3g01444 295 FunFam Phospholipid-transporting ATPase 121 264 - -
Rops3g01444 295 ProSitePatterns E1-E2 ATPases phosphorylation site. 18 24 IPR018303 -
Rops3g01444 295 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01444 Rops-Chr3 21535199 21540913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01444 4 290 Primary Pumps ATPases AT5G44240 65.854 1.86e-128 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01444 K01530 - gmx:100786505 412.535