Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01443 ATGCAGATAACTACCTCAGAACCTAAGGATATGGCTTTTGTTGTTGATGGCTGGGCACTTGAGATTGCCCTTAAGCACTACCGCAAAGCTTTCACTGAGCTGGCAATATTGTCCAGGACTGCTATATGTTGTCGGGTGACACCATCACAAAAAGCACAGATCTTAAAATCGTGTGATTATAGGACACTAGCAATTGGTGATGGTGGGAACGATGTAAGGATGATGCAACAGGCTGACATTGGTGTTGGCATTAGTGGTAATGAAGGATTGCAGGCAGCAAGGGCAGCTGATTACAGTATTGGAAAGTTTAGGTTCCTGAAAAGATTAATTCTTGTCCGTGGCCGGTATTCTTACAACCATACAGCATTTCTTTCTCAGTATTCATTCTATAAGTCCCTACTGATATGTTTCATTCAAATCTTTTTTTCATTTATTTCAGGTGTCTCTGGAACCAACCTCTTCAATTCAGTTAGCTTGATGGCTTATAATGTTTTCTACACTAGTATTTCTGTTCTAGTCAGTGTGCTTGACAAAGATCTTAGTGAGGAAACCATGATGCATCATCCACAAATTTTATTTTATTGCCAAGCTGGGAGGCTTCTAGATCCTAGTACATTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGCAATAGTTGTATTTGTAATTAGCATACATGCCTATGCCTATGAGAAAAGTGAAATGGAGGAGATCTCAATGGTTACACTTTCTAGTTGTATATGGTTGCAGGCATTTGTAGTAACAATGGAGACTAACTCCTTTAAAATACTACAACATCTAGCAATATGGATTAATTTGGCTGCCTTTTATGCCATCAACTGGATCTTCAGTGTTCTTCCTTCATCAGGGATGTATACGATTATGTTTCGGCTTTGTAGACAACCATCATATTGGATAACAATTTTTATCACAGTTGCAGCTGGAATAGGTCCAATTCTAGCCATAAGCAAAATCAATACTCTTCAGCAGGCTGAACATCTAGGTGGGCCAATTTTGTCTCTTGGCACCATCGAACCTCAGCCCAAGTCTATAGAGAAATATGCTTCACCCTTATCAATAACACAACCCAAAAACAGAAATCCTGAAAATGAACCTCTGTTATCAGATTCTCCAAATTCCACCAGAAGATCTTTTGGAGCAGGAACACCATTTGAATTTTTTCAGTCAGAGTCAAGATTATCACAATCTAGCTACACAAGAAATAAGGACAAGTGA 1236 0.3932 MQITTSEPKDMAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQILKSCDYRTLAIGDGGNDVRMMQQADIGVGISGNEGLQAARAADYSIGKFRFLKRLILVRGRYSYNHTAFLSQYSFYKSLLICFIQIFFSFISGVSGTNLFNSVSLMAYNVFYTSISVLVSVLDKDLSEETMMHHPQILFYCQAGRLLDPSTFAGWFGRSLFHAIVVFVISIHAYAYEKSEMEEISMVTLSSCIWLQAFVVTMETNSFKILQHLAIWINLAAFYAINWIFSVLPSSGMYTIMFRLCRQPSYWITIFITVAAGIGPILAISKINTLQQAEHLGGPILSLGTIEPQPKSIEKYASPLSITQPKNRNPENEPLLSDSPNSTRRSFGAGTPFEFFQSESRLSQSSYTRNKDK* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01443 411 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 6 328 - -
Rops3g01443 411 Pfam Phospholipid-translocating P-type ATPase C-terminal 93 325 IPR032630 -
Rops3g01443 411 MobiDBLite consensus disorder prediction 359 411 - -
Rops3g01443 411 NCBIfam HAD-IC family P-type ATPase 34 150 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops3g01443 411 Pfam haloacid dehalogenase-like hydrolase 53 84 - -
Rops3g01443 411 SUPERFAMILY Calcium ATPase, transmembrane domain M 88 320 IPR023298 -
Rops3g01443 411 MobiDBLite consensus disorder prediction 359 386 - -
Rops3g01443 411 Gene3D - 2 105 IPR023214 -
Rops3g01443 411 SUPERFAMILY HAD-like 16 112 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01443 Rops-Chr3 21516845 21531750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01443 1 408 Primary Pumps ATPases AT5G44240 80.048 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01443 K01530 - gmx:100786505 707.212