Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01441 ATGACTGGCAGAGAAATCCTCCATAAGATGAAGGCGAAAGCAGGGTTTGGAACACCAGAAACTGGGAAAGGAAAAAGCAAAATAACAGAACATATTACACATGGTTTTCACTTGGTGAAGGGAAAATCAAGTCATCCTATGGAAGATTATTTAGTTTCAGAATTCAAGAAAGAAAAGGACAAAGAATTAGGTTTGTTTGCTATATTTGATGGCCACTTGGGCCATGATGTTGCAAGCTATTTGCAGAACCATCTTTTCCAAAACATATTGAAACAGCATGACTTCTGGACTGAAACAGAAAGCGCAGTAAAAAGAGCTTATCTTGAAACAGATGAGAAAATATTGGAACAAACACTTGTACTGGGAAGAGGAGGATCAACAGCTGTAACTGCAATACTGATTGAAGGTCAGAAGCTTGTAATAGCTAATGTTGGTGACTCTAGAGCTGTAATTTGTGAGAATGGAAAGGCCAAGCAACTATCTGTTGATCACGAACCAAGCAAGGAAAAAAAATCTATAGAAAACCGTGGTGGTTTTGTGTCAAATCTTCCAGGAGATGTCCCTCGTGTAGATGGACAGCTAGCAGTAGCAAGAGCTTTTGGTGACAGGAGTTTGAAGATGCATCTTAGCTCGGAACCTGATGTGGTTGTCAAGGAAGTAAATCAACATACAGAGTTTCTTATTCTGGCTAGTGATGGAATATGGAAGGTTATGTCAAACCAAGAAGCAGTGGATTCTATTAGACAAATAAAGGATGCTCAGGCTGCAGCAAAGCACTTGATTGAAGAGGCTATTTCCAAGAAAAGTAAGGATGACATATCCTGCATAGTTGTGAAGTTCCAATGA 846 0.3948 MTGREILHKMKAKAGFGTPETGKGKSKITEHITHGFHLVKGKSSHPMEDYLVSEFKKEKDKELGLFAIFDGHLGHDVASYLQNHLFQNILKQHDFWTETESAVKRAYLETDEKILEQTLVLGRGGSTAVTAILIEGQKLVIANVGDSRAVICENGKAKQLSVDHEPSKEKKSIENRGGFVSNLPGDVPRVDGQLAVARAFGDRSLKMHLSSEPDVVVKEVNQHTEFLILASDGIWKVMSNQEAVDSIRQIKDAQAAAKHLIEEAISKKSKDDISCIVVKFQ* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01441 281 SMART PP2C_SIG_2 44 280 IPR001932 -
Rops3g01441 281 Pfam Protein phosphatase 2C 43 273 IPR001932 -
Rops3g01441 281 Gene3D - 27 281 IPR036457 -
Rops3g01441 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Rops3g01441 281 FunFam Probable protein phosphatase 2C 39 23 281 - -
Rops3g01441 281 CDD PP2Cc 40 280 IPR001932 -
Rops3g01441 281 SMART PP2C_4 23 278 IPR001932 -
Rops3g01441 281 PANTHER PROTEIN PHOSPHATASE 27 280 IPR015655 GO:0004722|GO:0006470
Rops3g01441 281 SUPERFAMILY PP2C-like 31 280 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01441 Rops-Chr3 21492819 21495597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01441 22 281 PP2C-type Phosphatase Gene Family AT4G28400 75.769 2.21e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01441 K17506 - gmx:100819846 514.998