Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01438 ATGGCCACTCTCCACAACTCTCCCAGTTTCAGAATCGCCATCGACACTCACCACCACCACGATCCTCTCTTGCCTTTTCTTTGGTCTGTCAGGAAAGCTCTAGAAGATTCCAATAATTCTGGTATGAATCTCAGTATGTTGCTCACAGATTGCATCAGAAACTTCAAGGACAGTGAACGGTACCGAAACGATGTCAGATTTCTCAAGATTTGGCTCCTCTATATGGGAGTTAGTGCTAATTATGATAGTGTTTTCAAAGAACTGCTGAATAGTAATGTATGTGCCAACAATGCTTCACTTTATGTGTGGTCTGCGTCTTTTTTTGAATCCAAGGGAAGATTGCGGGATGCCCTCACGGTCTATCAGCTCGGCAATTGCAGGAATGCAGAGCCTATTGAGTGGTTGAAGAAGGCACATAACTTATTTCTCACTAGAATTTCTGAAATATGGAATGCTGCTTCAAGCAAGAAGGTTGATCATAAAGAATCCGCGAAATTGGAAATTGGTGGCATTAATCCATGGGACACCTTCACCATGGATAACCTGTTGAAGAAGATATATCCTTTATTGACAAAATTTGACGGCTATCATTCCAGCACTAAACCTTACACGGGAAAAGTGGCCTTATCTACTTTGAAGAATGCATCAAGGAATAAAGTCATAGAGATAGGTAGACAGAAGTACCATATCAAGGGTTGTGCTGGACAGGGTGGTTTTGCTCAAGTATATAAGGCAAATGTCATCAGTGATCCTGATGATGTTGTTGCACTTAAGATACAAAAGCCAGCTTTCTCTTGGGAATTTTACATGTACCGTCAGCTTGATCAGCGTGTCTCAGGCAGAGAAAGGTCAAGCTATGGTTTCGCTCATAGAATTCATACCTATTCTGACTGTAGCATACTCATCTGTGACTATTTAGCTCATGGGACCCTACAGGATGTCATAAACTCATACGTGGTCATAGGAAAATCAATGGAAGAGGTGTTATGCATTTATTATACGACAGAAATGTTACAAATGGTTGAAACTTTGCATGATGTTGGCTTGATTCATGGTGATTTCAAGCCCGATAATCTGCTTATTCGCTATGCTCGGGGTGACCTTACAGAAGATGGGTTCTTGGACCGAAGTGGTGCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATTTGCATCTCTTTCCAGATCACACAGTATTCAAGGGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCAAGAGGATAAGCCATGGAAATTTCAGGTAGACGCATATGGCCTTTCTGCTGTTGTCCATATGATGTTGCATAATTCTTATATGGAAATTGTCAAAAAGGAATCACCTGATGGGGGCTATGAGTATCTTCCCAAACTACCCTTTAAACGTTACTGGAACGGTGAGCTCTGGAAGAATTTCTTCACTAAGATCCTAAATAAATACCCCGGCAATGATGATAGAAAGTTGCTACAGGATTTGAAGAAGTCCTTCCTCGATTATATGGGATCCAATCCCCAGCTTATAAAGAAACTAAAGGAGTTACTCGCGAAGCAAAGGGCTTCCTTGTGTTCTTCTTAG 1596 0.4179 MATLHNSPSFRIAIDTHHHHDPLLPFLWSVRKALEDSNNSGMNLSMLLTDCIRNFKDSERYRNDVRFLKIWLLYMGVSANYDSVFKELLNSNVCANNASLYVWSASFFESKGRLRDALTVYQLGNCRNAEPIEWLKKAHNLFLTRISEIWNAASSKKVDHKESAKLEIGGINPWDTFTMDNLLKKIYPLLTKFDGYHSSTKPYTGKVALSTLKNASRNKVIEIGRQKYHIKGCAGQGGFAQVYKANVISDPDDVVALKIQKPAFSWEFYMYRQLDQRVSGRERSSYGFAHRIHTYSDCSILICDYLAHGTLQDVINSYVVIGKSMEEVLCIYYTTEMLQMVETLHDVGLIHGDFKPDNLLIRYARGDLTEDGFLDRSGAWCDQGLCLVDWGRGIDLHLFPDHTVFKGDCRTSGFRCIEMQEDKPWKFQVDAYGLSAVVHMMLHNSYMEIVKKESPDGGYEYLPKLPFKRYWNGELWKNFFTKILNKYPGNDDRKLLQDLKKSFLDYMGSNPQLIKKLKELLAKQRASLCSS* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01438 531 Gene3D Transferase(Phosphotransferase) domain 1 225 528 - -
Rops3g01438 531 ProSiteProfiles Protein kinase domain profile. 228 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01438 531 Gene3D - 8 164 - -
Rops3g01438 531 SMART mad3_bub1_i 9 125 IPR013212 -
Rops3g01438 531 Pfam Protein kinase domain 229 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01438 531 SUPERFAMILY Protein kinase-like (PK-like) 226 456 IPR011009 -
Rops3g01438 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Rops3g01438 531 ProSiteProfiles BUB1 N-terminal domain profile. 8 163 IPR013212 -
Rops3g01438 531 Pfam Mad3/BUB1 homology region 1 9 124 IPR013212 -
Rops3g01438 531 SMART serkin_6 228 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01438 531 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 162 525 IPR015661 GO:0007094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01438 Rops-Chr3 21451333 21463500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01438 227 368 CBL-interacting serine-threonine protein kinases AT2G25090 28.767 4.53e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Rops3g01438 Pkinase 1.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01438 K02178 - gmx:100783171 900.197