Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01437 ATGGCTGATGGATCACAGTATCCATCAGTTGTTCAGAAGCTAGCTGGACAGTCTTATCTGGCGTCCAGGCTTAGCCCCAACTTTCACTCCAGGAATTATTCTGCGTCTGGTGCTTCCATCAATGGAGGACTGCAGTCTTCTGGTTTAGCAATGGTGTCACCTTCAATTACTGTGCCTGCTCCAGCTGAGAAAGGAGCATCTGCATTTTTTGTGGATTTTCTGATGGGAGGAGTGTCTGCTGCTGTATCCAAGACTGCTGCTGCTCCAATTGAACGTGTCAAATTACTTATCCAAAATCAGGATGAAATGATCAAAAGTGGCCGGTTATCTGAGCCATACAAGGGCATTAGTGACTGTTTTGCTCGAACCATGAAGGATGAGGGTGTAATTGCTCTTTGGAGAGGCAATACTGCTAACGTTATTCGTTACTTCCCTACTCAGGCCCTGAACTTTGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTTAAAAAGGACAGAGATGGCTACTGGAAGTGGTTTGCAGGGAATTTGGCATCTGGTGGGGCTGCTGGTGCTTCCTCCCTCTTATTTGTCTATTCCTTGGATTATGCCCGTACTCGTTTGGCAAATGATTCAAAGGCAGCAAAGAAGGGTGGTGAGAGGCAGTTTAACGGCTTGATTGATGTCTACAAGAAAACCATCAAGTCTGATGGCATTGCTGGCCTTTATCGTGGATTCAACATCTCATGTGTTGGAATCATTGTGTATCGTGGTCTTTACTTTGGAATGTATGATTCCCTGAAACCAGTTGTTTTGGTCGGTGGAATGCAGGATAGTTTCTTTGCTAGTTTCCTTTTGGGATGGGGAATCACAATTGGAGCTGGTTTGGCTTCTTATCCCATTGACACTGTGCGTAGAAGGATGATGATGACATCCGGAGAAGCTGTGAAGTACAAGAGCTCTTTGCATGCATTCCAAACAATCGTCGCAAAAGAAGGTACTAAGTCGCTCTTCAAAGGTGCTGGTGCAAACATATTACGTGCTGTTGCTGGCGCTGGAGTGCTTGCTGGTTATGATAAGCTGCAGCTCATCTTGTTTGGAAAGAAATATGGTTCTGGTGGCGGAGGCTAA 1113 0.4528 MADGSQYPSVVQKLAGQSYLASRLSPNFHSRNYSASGASINGGLQSSGLAMVSPSITVPAPAEKGASAFFVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGISDCFARTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKAAKKGGERQFNGLIDVYKKTIKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGGMQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQTIVAKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLILFGKKYGSGGGG* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01437 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 264 IPR018108 -
Rops3g01437 370 FunFam ADP,ATP carrier protein, mitochondrial 70 365 - -
Rops3g01437 370 Pfam Mitochondrial carrier protein 272 360 IPR018108 -
Rops3g01437 370 Pfam Mitochondrial carrier protein 68 164 IPR018108 -
Rops3g01437 370 Pfam Mitochondrial carrier protein 171 264 IPR018108 -
Rops3g01437 370 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 66 368 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g01437 370 SUPERFAMILY Mitochondrial carrier 69 354 IPR023395 -
Rops3g01437 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 160 IPR018108 -
Rops3g01437 370 Gene3D Mitochondrial carrier domain 70 365 IPR023395 -
Rops3g01437 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 272 358 IPR018108 -
Rops3g01437 370 PRINTS Mitochondrial carrier protein signature 187 205 IPR002067 GO:0055085
Rops3g01437 370 PRINTS Mitochondrial carrier protein signature 72 85 IPR002067 GO:0055085
Rops3g01437 370 PRINTS Mitochondrial carrier protein signature 135 155 IPR002067 GO:0055085
Rops3g01437 370 PRINTS Mitochondrial carrier protein signature 281 303 IPR002067 GO:0055085
Rops3g01437 370 PRINTS Mitochondrial carrier protein signature 85 99 IPR002067 GO:0055085
Rops3g01437 370 PRINTS Mitochondrial carrier protein signature 237 255 IPR002067 GO:0055085
Rops3g01437 370 PRINTS Adenine nucleotide translocator signature 113 134 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g01437 370 PRINTS Adenine nucleotide translocator signature 69 81 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g01437 370 PRINTS Adenine nucleotide translocator signature 172 185 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g01437 370 PRINTS Adenine nucleotide translocator signature 277 293 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops3g01437 370 PRINTS Adenine nucleotide translocator signature 146 158 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01437 Rops-Chr3 21436629 21440149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01437 3 360 Antiporters AT4G28390 81.301 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01437 K05863 - gmx:100818408 642.114