Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01436 ATGGCTTTAGCATCATCTTCTTATTCCTTTACCACTTGTGTGTTATTCATCCTTTTCTTGCATTTGTCTTGTTTCTTGAACAACCTTAATGCAAAGCACAGCATGGCCAATAGTCACAATCACCAGCACAAGCACAAGCATCAAAACAAGCACCAGCATACCCAGAATCCTCCATTGAATTCAAGGCTTTACCGTGCTTATCTTGGACTCCAAGCATGGAAGCAAGTGATCTACTCAGACCCAAGAAACTTCACAACCAATTGGGTAGGTCCTTCAGTTTGCAACTATTTTGGTATCTATTGTGCTCCGTCTGTTGATGACCCTAAAGTAACAGTTGTGGCTGGCATTGACCTAAACCATGGAGACATAGCTGGGTTCCTACCCAATGAAATAGGCCTACTTTCTGACCTTTCACTCATCCACCTTAATAGCAACCGTTTCTGTGGTATCATTCCAAAGACCTTAAGCAACCTTACTCAACTCTATGAGCTTGATCTTAGCAACAACAGATTTGTTGGACCTTTTCCATTTGTTGTGCTTTCCCTTCCTATGCTTTCCTTTCTTGACCTTCGCTACAATGAATTTGAAGGGCCATTGCCTCCTCAACTTTTCAACAAAGCTTTTGATGCTGTTTTTCTTAACAGCAACCGCTTCACCAGTTCCATTCCAACAAATTTAGGCCAAACCAAACTTTCTGTCCTTGTCTTTGCTAACAACAAATTTGGAGGGTGTCTGCCAGAAAGCATAGTAAACTTAGCTGATACTTTGGAAGAATTTGTCTTAATCAACACCAGCATATCAGGTTGTCTTCCACAACAAGTTGGGTTTCTCTACAAATTGAAAGTGTTGGATGTGAGCTTCAACAACATTGTTGGTCCCATACCTTATAGCCTTGCAGGGTTGTCTCATTTGGAACAGCTAAATTTAGGCCACAATATGATGAGTGGCATAGTCCCTATGGGAGTTTGTGAGTTACCAAACTTGGCAAATTTCACTTTTTCTTATAACTTCTTCTGTGAGGAAGAGGGTATTTGTCAGAACTTGACATCAAAGAGGATAGTTTTTGATGATAGAAGGAACTGTTTGCCAGAGAAGCCATTGCAAAGGAGCAAAAAGGAATGCAGTGCAAAACTTGAACACCCAGTTGATTGTGCTGAGCTTTGTTGTCTTGTAGGTGGTTCTGGGAACAATGTCACTGCTGGTTCTGGTTCAGTGGCTATTCCACCTGCTTCAATTCCAGCATCAATGCCAGTTTCTGCACCTCTTCTTGCACCAAGCTACCCTTGA 1287 0.4172 MALASSSYSFTTCVLFILFLHLSCFLNNLNAKHSMANSHNHQHKHKHQNKHQHTQNPPLNSRLYRAYLGLQAWKQVIYSDPRNFTTNWVGPSVCNYFGIYCAPSVDDPKVTVVAGIDLNHGDIAGFLPNEIGLLSDLSLIHLNSNRFCGIIPKTLSNLTQLYELDLSNNRFVGPFPFVVLSLPMLSFLDLRYNEFEGPLPPQLFNKAFDAVFLNSNRFTSSIPTNLGQTKLSVLVFANNKFGGCLPESIVNLADTLEEFVLINTSISGCLPQQVGFLYKLKVLDVSFNNIVGPIPYSLAGLSHLEQLNLGHNMMSGIVPMGVCELPNLANFTFSYNFFCEEEGICQNLTSKRIVFDDRRNCLPEKPLQRSKKECSAKLEHPVDCAELCCLVGGSGNNVTAGSGSVAIPPASIPASMPVSAPLLAPSYP* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01436 428 MobiDBLite consensus disorder prediction 37 52 - -
Rops3g01436 428 FunFam Leucine-rich repeat extensin-like protein 1 67 228 - -
Rops3g01436 428 SUPERFAMILY L domain-like 70 353 - -
Rops3g01436 428 MobiDBLite consensus disorder prediction 36 57 - -
Rops3g01436 428 Pfam Leucine rich repeat 279 336 IPR001611 GO:0005515
Rops3g01436 428 Gene3D Ribonuclease Inhibitor 68 227 IPR032675 -
Rops3g01436 428 Gene3D Ribonuclease Inhibitor 228 363 IPR032675 -
Rops3g01436 428 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01436 Rops-Chr3 21431822 21433413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01436 60 389 Leucine-rich Repeat extension Gene Families AT3G24480 54.381 4.71e-132 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01436 - - gmx:100782629 699.508