Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01425 ATGTTTTTAAGTTTATCAAGCACCAGAAGGGAACAGAAAGAGGAAAATTTTGAAGATTGGGAATCCGAGTATTGGCCACATAGGATTAGCTACAAAGAGATTAGTGCTGCACCAAGGGGATTCAATGAAGAGAATTTGATCAGTATTGGAACAAGTGGGAAAGTAAACAAAGAAGTTTTAAATGGAGCAGAGCTTGTGGAGTTTTATACCCACATGAGGATCCGGGTGGTTGAGGTCATGCATAGGGACATCAAAGCAGGCAATGTGATGCTTGACAAGGACATGAATGCCAAATTAGGAGATTTTAGGCTAGCCAGGCTGCATCACAGGGGACAGTTGCCACAGGACAGAGAAGGTTTCCTTCTTTGA 369 0.4255 MFLSLSSTRREQKEENFEDWESEYWPHRISYKEISAAPRGFNEENLISIGTSGKVNKEVLNGAELVEFYTHMRIRVVEVMHRDIKAGNVMLDKDMNAKLGDFRLARLHHRGQLPQDREGFLL* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01425 122 Pfam Protein kinase domain 78 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01425 122 SUPERFAMILY Protein kinase-like (PK-like) 16 111 IPR011009 -
Rops3g01425 122 PANTHER - 68 110 - -
Rops3g01425 122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Rops3g01425 122 Gene3D Transferase(Phosphotransferase) domain 1 57 119 - -
Rops3g01425 122 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01425 Rops-Chr3 21170565 21171370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01425 10 63 Receptor kinase-like Gene Family AT4G04960 53.704 1.22e-14 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Rops3g01425 Pkinase 8.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01425 - - ahf:112795063 110.538