Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g01425 | ATGTTTTTAAGTTTATCAAGCACCAGAAGGGAACAGAAAGAGGAAAATTTTGAAGATTGGGAATCCGAGTATTGGCCACATAGGATTAGCTACAAAGAGATTAGTGCTGCACCAAGGGGATTCAATGAAGAGAATTTGATCAGTATTGGAACAAGTGGGAAAGTAAACAAAGAAGTTTTAAATGGAGCAGAGCTTGTGGAGTTTTATACCCACATGAGGATCCGGGTGGTTGAGGTCATGCATAGGGACATCAAAGCAGGCAATGTGATGCTTGACAAGGACATGAATGCCAAATTAGGAGATTTTAGGCTAGCCAGGCTGCATCACAGGGGACAGTTGCCACAGGACAGAGAAGGTTTCCTTCTTTGA | 369 | 0.4255 | MFLSLSSTRREQKEENFEDWESEYWPHRISYKEISAAPRGFNEENLISIGTSGKVNKEVLNGAELVEFYTHMRIRVVEVMHRDIKAGNVMLDKDMNAKLGDFRLARLHHRGQLPQDREGFLL* | 123 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g01425 | 122 | Pfam | Protein kinase domain | 78 | 113 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g01425 | 122 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 111 | IPR011009 | - | |
Rops3g01425 | 122 | PANTHER | - | 68 | 110 | - | - | |
Rops3g01425 | 122 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 79 | 91 | IPR008271 | GO:0004672|GO:0006468 | |
Rops3g01425 | 122 | Gene3D | Transferase(Phosphotransferase) domain 1 | 57 | 119 | - | - | |
Rops3g01425 | 122 | ProSiteProfiles | Protein kinase domain profile. | 1 | 122 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g01425 | Rops-Chr3 | 21170565 | 21171370 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g01425 | 10 | 63 | Receptor kinase-like Gene Family | AT4G04960 | 53.704 | 1.22e-14 | 67.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Rops3g01425 | Pkinase | 8.6e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g01425 | - | - | ahf:112795063 | 110.538 |