Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01418 ATGGCGTCTGGATCATCCGGTCGCGGAAACTCCGGTTCCAAAGGCTTCGATTTCGGTACGGATGACATCCTTTGTTCCTACGAAGATTACTCCAACAGGGATTCCAATTCCAATGGCAATCACGCCGATCCAGTCATCAACCCCAATTCAACTAAGGATTTTCACAAGTCAAGGGTGGCAAGGACATCATTGTTTCCTGCTACTGCCTATAATCCACCTGAAGATTCTTTTAGCCAAGATGTGATTGCAACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTCATGCGGTTTCTGGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATATTGCTACAATCTTGACAAATCTATTGGAGAAATGAAATCTGATTTAAATCGTGACCATGGGGAGCAAGATTCAAAGCTCAAATCTCTTGAAAAGCACATTCAGGAGGTTCACAGGTCAGTACAAATTTTAAGAGACAAGCAAGAGCTAGCCGAGACTCAGAAGGAATTAGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCACAGTCCAATGAGGACAGATCTTCGCCTCCTACCACAGATCCTAAAAAAACTGATAATGCATCTGATGCACACAACCAGCAGTTAGCTCTTGCCCTGCCTCATCAAATCGCCCCCCAGCCTCTGCCTGCGACACCCCCGACCCAAGCTCCTGCACCAAATGTGACTCAAGCCCCTCAACAACCTGCTTATTACATGCCACCCACTCCTTTGCCCAATCCACCAGCCGTGGCGAGCCAGCTCCCCCAGAACCAGTATATACCTTCTGATCAACAATATCGAACACCCCAACTCCAAGACATGTCACGGGTGGCTCCACAACCAGCACCACCATCTCAAGTAACCCCGCCCCAATCCGTGCAACAATTTTCTCAGTATCAGCAGCCACAGCCACAGCAACAGCAGCAGCCGCAGCAACAACAACAATGGCCCCAGCAGTTACCTCAGCAGGTGCAACCTCAAATAAGACCCCCCTCATCAACTGTGTACCCTCCATACCAGCCAAGTCAAGCAACAAATCAATCACCTACAGAAACACTGCCAAACAGCATGCCCATGCAAATGCCATATTCAGGTGTTCCACCACCAGGATCTAGCCGCGCTGATACCATACCATATGGATATGGAGGAACTGGTAGAACCGTTCCACAGCAACAACCTCCACCCCAGCAACTCAAGGGTTCTTTCCCTGCACAACCTGGCGACATGTACGGAACTACCGGGACCCACCCTGCACTCCCTCCTCCACCTGGCAACACTGCATACATGATGTATGATGGTGAGGGAGGTGGAAGAACCACACATCATCCACCCCAACCTCCTCCTCCTCATTATGCTCAAGGTGGATACCCTCCAACAAGTGCTTCCCTTCAGAACCCTACAAGTCATAACCTTATGGTCAGAAATCCTGGCCAGTCACAATTTGTACGCAACCATCCCTACAATGAGTTGATTGAGAAATTGGTGAACATGGGATTTAGGGCTGACCATGTGGCAAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGCCTATAGATTTCAACTCTGTTCTTGACAGGTTGAATGTGCATAGCTCTGTGGGACCCCAGAGAGGATGGTCAGGGTGA 1650 0.4873 MASGSSGRGNSGSKGFDFGTDDILCSYEDYSNRDSNSNGNHADPVINPNSTKDFHKSRVARTSLFPATAYNPPEDSFSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKSDLNRDHGEQDSKLKSLEKHIQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSQSNEDRSSPPTTDPKKTDNASDAHNQQLALALPHQIAPQPLPATPPTQAPAPNVTQAPQQPAYYMPPTPLPNPPAVASQLPQNQYIPSDQQYRTPQLQDMSRVAPQPAPPSQVTPPQSVQQFSQYQQPQPQQQQQPQQQQQWPQQLPQQVQPQIRPPSSTVYPPYQPSQATNQSPTETLPNSMPMQMPYSGVPPPGSSRADTIPYGYGGTGRTVPQQQPPPQQLKGSFPAQPGDMYGTTGTHPALPPPPGNTAYMMYDGEGGGRTTHHPPQPPPPHYAQGGYPPTSASLQNPTSHNLMVRNPGQSQFVRNHPYNELIEKLVNMGFRADHVASVIQRMEESGQPIDFNSVLDRLNVHSSVGPQRGWSG* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01418 549 Coils Coil 139 175 - -
Rops3g01418 549 MobiDBLite consensus disorder prediction 441 476 - -
Rops3g01418 549 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 3 549 - -
Rops3g01418 549 Pfam UBA-like domain (DUF1421) 495 539 IPR010820 -
Rops3g01418 549 MobiDBLite consensus disorder prediction 259 289 - -
Rops3g01418 549 MobiDBLite consensus disorder prediction 172 190 - -
Rops3g01418 549 MobiDBLite consensus disorder prediction 297 338 - -
Rops3g01418 549 MobiDBLite consensus disorder prediction 219 422 - -
Rops3g01418 549 MobiDBLite consensus disorder prediction 244 258 - -
Rops3g01418 549 MobiDBLite consensus disorder prediction 220 234 - -
Rops3g01418 549 MobiDBLite consensus disorder prediction 172 203 - -
Rops3g01418 549 MobiDBLite consensus disorder prediction 29 53 - -
Rops3g01418 549 MobiDBLite consensus disorder prediction 346 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01418 Rops-Chr3 21102375 21110118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01418 494 549 Trihelix Transcription Factor Family AT5G14540 36.923 1.59e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01418 - - adu:107478128 687.567