Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01405 ATGGCGAATTTGGAGATTATTGAGCTTGACAAAAACTGTGCTAAGACAGTAGAAGAGATTGTGAAATTGGAGAGAAAGATCTTTCCCGAACACAACAAATCACTCACTTCCTTCTTTGAAGATGAACTAAAAAAGAAGAACAGTGGATTGCTTTATCTTCATGTGGATGGTGAACTTGTAGGCTATGTCATGTATTATTGGCCTTCTTCCTTGTATGCCTCCATCATCGAGCTCGCAGTGAAGGAGCAATGGAGGAGGCAAGGTTATGGAGAGGCTTTGCTGAAAGCAGCAATTGAGAAATGCAGGACAAGGAAAGTTTCACGCATAATGCTCCATGTGGATCCCTTGAGGACCCCTGCATTGAATCTTTACAAGAAACATGGTTTCCAAATTGACAGTTTGATTGAAGGCTACTACTCCTCAAATAGAAATGCCTATAGAATGTACTTGGACTTTGATTCCAATTGA 468 0.406 MANLEIIELDKNCAKTVEEIVKLERKIFPEHNKSLTSFFEDELKKKNSGLLYLHVDGELVGYVMYYWPSSLYASIIELAVKEQWRRQGYGEALLKAAIEKCRTRKVSRIMLHVDPLRTPALNLYKKHGFQIDSLIEGYYSSNRNAYRMYLDFDSN* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01405 155 Gene3D - 6 152 - -
Rops3g01405 155 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 154 - -
Rops3g01405 155 CDD NAT_SF 56 112 - -
Rops3g01405 155 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 4 153 IPR000182 GO:0016747
Rops3g01405 155 Pfam Acetyltransferase (GNAT) family 19 129 IPR000182 GO:0016747
Rops3g01405 155 Coils Coil 6 26 - -
Rops3g01405 155 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 17 151 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01405 Rops-Chr3 20878726 20880073 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops3g01405 Acetyltransf_1 5.6e-20 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01405 - - gmx:100808645 260.766