Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01403 ATGGCGAATGTGGAGATTATTGAGCTTGACAGAAACTGTGCTAAGATAGTGGAAGAGATTGTGAAATTGGAGAGAAAGATCTTTCCTAAACACGAATCACTAGCTTCGTTCTTTGACAATGAACTGAGAAAGAAGAACAGTGGATTGCTTTATCTTCATGTGGATGGCCAACTTGCTGGTTATGTCATGTATTCTTGGCCTTCTTCCATGTTTGCCTCTATCACCAAGCTTGCAGTGAAGGAGCAATGGAGGAGGAAAGGCCATGGAGAGGCTCTGTTGAAAGCAGCAATTCAGAAATGCAGGACAAGGAAAGTTTCTCGCATAATGCTTCATGTGGATCCCTCGAGGAACCCTGCATTGAATCTTTATAAGAAACATGGTTTCCAAGTTGACAGTTTGATTGAAGGCTACTACTCATCTGATAGAAATGCTTATAGAATGTACTTGGACTTTGATTTCAATTGA 465 0.4086 MANVEIIELDRNCAKIVEEIVKLERKIFPKHESLASFFDNELRKKNSGLLYLHVDGQLAGYVMYSWPSSMFASITKLAVKEQWRRKGHGEALLKAAIQKCRTRKVSRIMLHVDPSRNPALNLYKKHGFQVDSLIEGYYSSDRNAYRMYLDFDFN* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01403 154 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 4 152 IPR000182 GO:0016747
Rops3g01403 154 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 152 - -
Rops3g01403 154 Pfam Acetyltransferase (GNAT) family 19 128 IPR000182 GO:0016747
Rops3g01403 154 CDD NAT_SF 55 111 - -
Rops3g01403 154 Gene3D - 7 150 - -
Rops3g01403 154 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 17 151 IPR016181 -
Rops3g01403 154 Coils Coil 6 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01403 Rops-Chr3 20868153 20869430 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops3g01403 Acetyltransf_1 2.9e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01403 - - gmx:100808090 266.159