Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01382 ATGGGTTGTTCTGTCTCAACAAGCAGTCGAAGTACTTGTAGCAGCAGGAGCAATGGAGAGAGGGTCTCTCCATCTTGCTTAGAAGTTGGATTCTGTAGGCAAAAGAGAGCAAGGAGAACGTTTTCTGATCATGTTATTTCTCTTCACCATTTACCATCCTTACCCAGCAGAATTTTCACTAATGGAAAGAGCCGAGCTTCTTGCATATTTACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCTGAAGATATGATCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCATCTTGTTGCACGTAAAGTGAGGGATGCCTTGCCTGTAAAACTGCTTTCTTTTTTGCATTCTCATGAATCGAAGCGAAATAGGTCAGGTAAAGGTTGCTTCAAAGGGAACATAAAACCTGATGGTGGAGACTCTGAGAAGGAATGTTCTCCTGAGGATAAACTGAACTCTACATGGAGAGAAGCTTTCATGAAGGCATACAAGGCAATGGACAAAGAGCTCAGGTCTCATCCGAATCTGGACTGCTTCTGTAGTGGGAGCACAGCTGTGACTATAGTGAAGCAGGGTTCAAATCTGTTCATGGGAAATATTGGCGATTCTCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAGTTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCTGAAAGAATTAAACGTTGCAAGGGTAGGGTATTTGCATTGCAAGATGAGCCAGAAGTGCCTAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTCGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTTACAGACAGAGATCAGTTCATTGTTCTTGCCTCAGATGGGGTGTGGGATGTTTTAAGCAATGAGGAGGTAGTTGAGATAGTATCTTCAGCACCAACAAGATCATCAGCAGCAAGGATTCTGGTAGATTCAGCTGCTAGGGAATGGAAACTTAAATACCCTACTTCAAAGATGGATGACTGTGCTGTGGTGTGCTTATTTTTGGATGGAAAAATGGACTCAGAGTCTGATTATGATGAACAAGGCTTTTCTTCTGCAACCATCCAAAGCAACCATTCAGGCAATCCAATTGAGTCAGATGATGGTCAAAAGTCTGAACCATCTTTGCAAAGGAACTTCACTGTGAGATCCTCAGAAGAAAATGAGACTAATGGAACAACAACAACACTATGTGTTGTTGATGTTGAAGATATAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGTGTCACCCGTGTAAACTCACTTGTCCAACTTCCTAGATTTTCTGAGGAAAGACCAAACTCTTAG 1425 0.433 MGCSVSTSSRSTCSSRSNGERVSPSCLEVGFCRQKRARRTFSDHVISLHHLPSLPSRIFTNGKSRASCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPHGHLVARKVRDALPVKLLSFLHSHESKRNRSGKGCFKGNIKPDGGDSEKECSPEDKLNSTWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDSNDSMVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNGTTTTLCVVDVEDITSSADDQNWSGLEGVTRVNSLVQLPRFSEERPNS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01382 474 CDD PP2Cc 72 370 IPR001932 -
Rops3g01382 474 MobiDBLite consensus disorder prediction 1 22 - -
Rops3g01382 474 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Rops3g01382 474 PANTHER PROTEIN PHOSPHATASE 49 368 IPR015655 GO:0004722|GO:0006470
Rops3g01382 474 MobiDBLite consensus disorder prediction 381 430 - -
Rops3g01382 474 FunFam probable protein phosphatase 2C 52 57 373 - -
Rops3g01382 474 MobiDBLite consensus disorder prediction 380 430 - -
Rops3g01382 474 MobiDBLite consensus disorder prediction 132 159 - -
Rops3g01382 474 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Rops3g01382 474 MobiDBLite consensus disorder prediction 1 23 - -
Rops3g01382 474 Gene3D - 58 378 IPR036457 -
Rops3g01382 474 Pfam Protein phosphatase 2C 142 347 IPR001932 -
Rops3g01382 474 SMART PP2C_4 55 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01382 Rops-Chr3 20431221 20434190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01382 14 474 PP2C-type Phosphatase Gene Family AT1G03590 71.336 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01382 - - gmx:100798340 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01382 3 20431221 20434190 Rops3g01382 3 20431221 20434190 ECH
Rops7g00971 7 12849317 12853383 Rops3g01382 3 20431221 20434190 PCT