Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01379 ATGGATTGGAAGAGATCTGTTTTGGAGTTCAAGAGGGTCAAGATCTATGAACAAGTTCTGTTAGGATTTTTGTTGATCTGTACAATTCAGATTTCAAGTGCAATTACTGACCCCACTGATGTTGCTGCTATTAATAGCTTATATGCTGCACTGGGATCCCCTGCTCTCCCTGGGTGGGTTGCTGCTGCTGGAGATCCATGTGGAGAAGGGTGGCAAGGCATTCAGTGTAATGGTTCATTCATACAAAAAATAGTTCTGAATGGTGCAAATTTGGGAGGAGAACTGGGTGATAATCTGGCAACATTTGTTTCAATCACAGTAATTGATCTAAGCAACAATCACATTGGAGGAAGTATTCCAGCCAATTTGCCAGTTACCATGAGAAACTTTTTTCTTTCAGATAACCAGTTCACTGGAAGTATTCCAACCACGTTATCCACTTTAACTGGATTGACAGACATGTCTCTTAACAACAATAATTTATCTGAAGAAATACCAGATGCATTTCAGTCACTTACGCAATTGATCAATCTCAATTTACTGCTGTGCAAAGATTTATCTAATAATAATTTGAGTGGAGAATTGCCACCTCCGGTGGAAAATTTGTCATCTCTCACCACCCTACACTTACAGACCAATCAACTGTCGGGGACACTTGATGTTTTACGAGACCTTCCTTTGAAAGATTTGAATATTGAGAACAACCAGTTTGCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCTACCTTCAGACAAGCTGGAAACCCATTTAATAATGTAAATGCTGCTGCACCTCGTGCTCCTTCACCACGCTTCCCAGCGACGACAACACCGGTTTCTGGGGTACCATCTTCTGGTCGTGTGCTTTCTAAGCAGGCTGATGGACCAACTGCAGCAAATGAATCAAATTCTGGGAAATCCAAAAAACACACCAAAAGGGTGGTTTGGATATCTATTGCTAGTGTAATGGGATTCATTATTTTGGTACTAGCATTCCTTCTATTTATTCCAAGATGTGCCAGAAGGGAACGGGTTGACAGAAGGTCCAAGCGACATCAAATTGGTGCATATGGAGGGGATGTTTCAAGGCCAAAAGAGAATCATCAACCAGAGACCAGGAGAACGTGGGTTATTCCAAATCGACAGGATGAGCCAGAGAAGGATATGCAAAGAATGGAAACAATATCAAAGCCGGGAGATCATGAGATAGATATGAACACACTAGAAGTGTATTCAATGCCTCCTCCTCCACCTCCACCTCCTCTTCCGCCCCCTCCTCCTCCCCCTCCGCCCCCACCTCCTACTACCACTACTAAGAGGGTGATTGTTGAGCCAACCACTTCCCACAGAGGGACAGGGGCTAATGTCCATCCACCCACAAGAAGTTCGGTTCCTCCTCCCACTTTTGTAAAATCTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGGGGAGGCATGTTGGGCAGTGTGTACAGGGCAGAGCTTCCTAATGGGAAGCTATTTGCTGTAAAGAAACTGGACAAGAGAGCCTCTGATCACCAGAAGGATGATGAGTTTCTTGAATTGGTAAATAGTATTGACAGAATACGACATGTGAATATTGTTGAGCTTATTGGATACTGTTCAGAGCATGGTCAGAGGCTTCTGATCTATGAGTATTGCAGTAATGGGTCACTGTTTGATGCACTCCACTCAGATGATGAATTCAAAACAACACTCCCATGGAATGCTCGCATTCGAATGGCACTTGGGGCAGCCAGAGCCTTAGAATATTTGCATGAGCTATGTCAGCCGCCTGTGGTCCATAGAAATTTGAAGTCTGCCAATATTCTCCTCGACGATGATCTATCTGTGCGTGTATCCGATTGTGGTTTAGCTCCATTAATATCTTCAGGATCTGTAAGCCAGCTTTCGGGGAACCTGCTAACAGCTTATGGCTATGGAGCTCCAGAATTTGAGTCAGGAATTTACACGTATCAAAGTGATGTATACAGCTTTGGAGTGATTATGTTAGAACTTTTGACTGGCCGTCAGTCCCATGACAGGACACGTCCACGAGGGGAGCAATTTCTTGTCAGATGGGCAATTCCTCAACTTCATGATATTGGTGCATTATCAAGCATGGTTGATCCTTCTTTAAATGGAGACTACCCTGCAAAATCATTGTCAAATTTTGCAGACATTATTTCACGATGCCTTCAGTCCGAGCCAGAATTTAGGCCAGCAATGTCAGAGGTCGTCCTATCTTTGATAAATATGATAAAGAAGGAGTCTCAGCAAAGTGAATAA 2319 0.4325 MDWKRSVLEFKRVKIYEQVLLGFLLICTIQISSAITDPTDVAAINSLYAALGSPALPGWVAAAGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDNLATFVSITVIDLSNNHIGGSIPANLPVTMRNFFLSDNQFTGSIPTTLSTLTGLTDMSLNNNNLSEEIPDAFQSLTQLINLNLLLCKDLSNNNLSGELPPPVENLSSLTTLHLQTNQLSGTLDVLRDLPLKDLNIENNQFAGPIPPKLLSIPTFRQAGNPFNNVNAAAPRAPSPRFPATTTPVSGVPSSGRVLSKQADGPTAANESNSGKSKKHTKRVVWISIASVMGFIILVLAFLLFIPRCARRERVDRRSKRHQIGAYGGDVSRPKENHQPETRRTWVIPNRQDEPEKDMQRMETISKPGDHEIDMNTLEVYSMPPPPPPPPLPPPPPPPPPPPPTTTTKRVIVEPTTSHRGTGANVHPPTRSSVPPPTFVKSFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPNGKLFAVKKLDKRASDHQKDDEFLELVNSIDRIRHVNIVELIGYCSEHGQRLLIYEYCSNGSLFDALHSDDEFKTTLPWNARIRMALGAARALEYLHELCQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLISSGSVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELLTGRQSHDRTRPRGEQFLVRWAIPQLHDIGALSSMVDPSLNGDYPAKSLSNFADIISRCLQSEPEFRPAMSEVVLSLINMIKKESQQSE* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01379 772 MobiDBLite consensus disorder prediction 365 390 - -
Rops3g01379 772 MobiDBLite consensus disorder prediction 274 305 - -
Rops3g01379 772 MobiDBLite consensus disorder prediction 412 439 - -
Rops3g01379 772 Gene3D Ribonuclease Inhibitor 183 257 IPR032675 -
Rops3g01379 772 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 564 772 - -
Rops3g01379 772 Gene3D Ribonuclease Inhibitor 36 182 IPR032675 -
Rops3g01379 772 SUPERFAMILY L domain-like 36 249 - -
Rops3g01379 772 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 270 - -
Rops3g01379 772 SUPERFAMILY Formin homology 2 domain (FH2 domain) 425 435 - -
Rops3g01379 772 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 453 563 - -
Rops3g01379 772 MobiDBLite consensus disorder prediction 262 308 - -
Rops3g01379 772 ProSiteProfiles Protein kinase domain profile. 486 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01379 772 MobiDBLite consensus disorder prediction 409 440 - -
Rops3g01379 772 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Rops3g01379 772 SUPERFAMILY Protein kinase-like (PK-like) 462 760 IPR011009 -
Rops3g01379 772 Gene3D Transferase(Phosphotransferase) domain 1 564 772 - -
Rops3g01379 772 Pfam Protein tyrosine and serine/threonine kinase 489 759 IPR001245 GO:0004672|GO:0006468
Rops3g01379 772 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 760 - -
Rops3g01379 772 MobiDBLite consensus disorder prediction 345 390 - -
Rops3g01379 772 Gene3D Phosphorylase Kinase; domain 1 459 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01379 Rops-Chr3 20305814 20313933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01379 31 771 Strubbelig Receptor Gene Family AT4G03390 62.127 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Rops3g01379 PK_Tyr_Ser-Thr 3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01379 - - ahf:112737625 1086.63