Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01375 ATGGCGAATGGGTTGGAGAGAGAAAGTGGGTTCTCAATATTCAGCGATGATGAGCTTAGTGAGGTGAGTGGGGTGAAGCGTGTTGATGACTATGTTGAAGTGACGTGTGGGTGTACCAGCCATAGATATGGTGATGCTGTTGGAAGGCTTAGGGTTTTCGTCAATGGGTATCTCGAAATCACTTGTGAATGCACCCCTGGTTGCCAAGAAGACAAGTTGACTCCTTCTGCATTTGAGAAACACTCTGGAAGAGAGACAGCCAGGAAATGGAAGAATAATATCTGGGTAATGGTTAATGGTGAGAAGGTTCCATTGTGTAAAACAGTGCTGCTCAAATACTACAATCAAGTGTCAAGAGCTGCAAATGGATCTCATAGATCCCAAAATGGTCGGGCTTGTCACCGTGATGAGTTTGTTCACTGTACTAGGTGCAACAAAGAGCGTAGGTTCCGTCTGAGGTCTAAAGAGGAATGCCGCATTCACCATGATGCTATGGCAGACCCGAATTGGAAATGTTCTGATCTACCATATGACAAAATTACATGTGATGATGAAGAAGAAAGAGGAAGTCGTAGGGTTTACAGGGGATGCACTCGCTCTCCAACATGCAAAGGTTGCACTTCTTGTGTGTGCTTTGGGTGTGATATCTGCCGTTTTTCAGATTGCAGCTGCCAGACTTGCACTGACTTTACTAACAATGCCAAAGCTTGA 711 0.4501 MANGLERESGFSIFSDDELSEVSGVKRVDDYVEVTCGCTSHRYGDAVGRLRVFVNGYLEITCECTPGCQEDKLTPSAFEKHSGRETARKWKNNIWVMVNGEKVPLCKTVLLKYYNQVSRAANGSHRSQNGRACHRDEFVHCTRCNKERRFRLRSKEECRIHHDAMADPNWKCSDLPYDKITCDDEEERGSRRVYRGCTRSPTCKGCTSCVCFGCDICRFSDCSCQTCTDFTNNAKA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01375 236 ProSiteProfiles SAND domain profile. 17 105 IPR000770 GO:0003677
Rops3g01375 236 PANTHER PROTEIN ULTRAPETALA 1 12 235 IPR020533 -
Rops3g01375 236 SUPERFAMILY SAND domain-like 51 95 IPR010919 -
Rops3g01375 236 Gene3D - 25 127 IPR010919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01375 Rops-Chr3 20262204 20267108 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Rops3g01375 SAND 3.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01375 - - gmx:100796203 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01375 3 20262204 20267108 Rops3g01375 3 20262204 20267108 ECH