Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01368 ATGTTATTGTTTTATTCAGTTTCACCTATGATGTTTCAATCCAACTTGTATGAGGTTGTAGTTTACCCAAGTCCCTGTTTAAGGGAGAACCTACTTGGTGTTGCTACATTTCCTATGACAGCAATGATTGATCTGAGGACCAGGCAAGTTGAAAAGTTGAAACAAGAAAACACTCTCACAGAGAGCTCAAAAGTTGAAGCTCTTTGTGGTGCTGCCCTGTCACATCCTTTTCTGAAGGAATCTCATCAAAATTTGGTTCAATTCCACATGAGGGTTGCTTCTTTCTTCAGTGTTGTCTCCAGGGTTCTCAACAGTTCCCCTTCTTCCTCCAAACTTGTGCTTCTCTGCACACTCAGTGGTGGAGGTGTTGTGGCTTACTCAGAGTTACAACCAGAAGTGCAACGTCCTAGTATTGATGCTGATGAGCCCCCAAAAAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCTGCTACCAGTTTCCTTAAGGGTGTGGATGCTTCATTATATGACGTTCAGGTTGTTTCACCTTGTAACTACTTTGCATTTACTCCCTTGTTGCCCAGTGTCACTTGTGGGACAGTTGAAGCCCGGAGCATTGTGGAGCCAGTCCGAAACATCATTAAAAAGAGAAAAGGAGAAATAAAATTCTGGGAGGCAGAATGTGTCAAGATTGATGCTGCAAACAAGAAGGTTTCTTGTCGGTCCAATATTGACAACCACTTAGTGGGAAGTGGTGAATTCTCTCTGGACTATGACTTCTTGGTTGTAGCAGTAGGGGCACAAGTAAATACTTTTAACACCCCTGGTGTCAAGGAGAATTGTCATTTTCTGAAGAATGTTGAGGATGCTCAGAAGATCAGACTGTCTGTAGTAGATTGTTTTGAGAAGGCTGTTCTTCCTAGTCTTTCTGATGAAGAACGAAGGTCAAATCTTCATTTTGTAGTTGTTGGAGGAGGTCCTACTGGTGTTGAATTTGCTGCAGAGCTGAATGATTATGTCCAAGAAGATTTGATCAAATTATATCCAACTGTTAAAGATATTGTGAAGATAACATTGATTCAATCAGGAGATCACATCTTGAACATGTTTGATGAAAGAATAAGTTCATTTGCTGAGCAGAAGTTTGTGAGAGATGGTGTAGAAGTTCAAACAGGATGCCGGGTTGTCAATGTTAATGAAAAGGAAATTACAATGAAGCTGAAATCAACAGGAGAGGTCTGCTCTATTCCCCATGGATTGATTGTCTGGTCCACCGGCATTGCAACTCTTCCAGTTGTAAGGGACTTTATGGAAGAAATTGGTCAGGGTAAAAGGCATGTATTAGCAACTGATGAATGGTTGCGAGTGAAGGGATGTGAAGATGTGTATGCCGTTGGTGATTGTTCTTCAATAAGTCAACGTAAAATCATGGATGATATCTCAGCCATATTTGAGGCTGCCGACAAAAATAACTCTGGTTCCTTAACTGTTGAAGAATTTCGGGATGTGATGGATGATGTCATCTTAAGATATCCGCAAGTTGAACACTATTTAAAGAGGAAACATCTACGCGATTTGACTTTTCTGTGGAAAGATTCTCAAGGAAATGAAATCAAAGAAATAGACATAGAAGGGTTTAAGTTGGCCCTGTCTCATGCGGATTCACAGATGAAGAGTCTGCCAGCAACTGCACAGGTTGCTGCACAACAAGGTGCATATCTTGCTAGATGCTTTAACCGCATGGATGAAGAGCATCCTGAAGGTCCTCGACGATTTAGAGGAACTGGACGTCATAAGTTTCTTCCCTTCCGGTATAAACATCTTGGGCAATTTGCTCCACTGGGTGGGGAGCAGGCAGCTGCAGAACTTCCTGGAGACTGGGTTTCTATTGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGTTCTTGGTCATATCTGATTGGACAAGAAGATTCATATTTGGGAGGGATTCTAGTCGAGTTTAA 1998 0.4209 MLLFYSVSPMMFQSNLYEVVVYPSPCLRENLLGVATFPMTAMIDLRTRQVEKLKQENTLTESSKVEALCGAALSHPFLKESHQNLVQFHMRVASFFSVVSRVLNSSPSSSKLVLLCTLSGGGVVAYSELQPEVQRPSIDADEPPKKKVVVLGTGWAATSFLKGVDASLYDVQVVSPCNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEIKFWEAECVKIDAANKKVSCRSNIDNHLVGSGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKNVEDAQKIRLSVVDCFEKAVLPSLSDEERRSNLHFVVVGGGPTGVEFAAELNDYVQEDLIKLYPTVKDIVKITLIQSGDHILNMFDERISSFAEQKFVRDGVEVQTGCRVVNVNEKEITMKLKSTGEVCSIPHGLIVWSTGIATLPVVRDFMEEIGQGKRHVLATDEWLRVKGCEDVYAVGDCSSISQRKIMDDISAIFEAADKNNSGSLTVEEFRDVMDDVILRYPQVEHYLKRKHLRDLTFLWKDSQGNEIKEIDIEGFKLALSHADSQMKSLPATAQVAAQQGAYLARCFNRMDEEHPEGPRRFRGTGRHKFLPFRYKHLGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRFLVISDWTRRFIFGRDSSRV* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01368 665 SUPERFAMILY FAD/NAD(P)-binding domain 311 465 IPR036188 -
Rops3g01368 665 ProSitePatterns EF-hand calcium-binding domain. 481 493 IPR018247 -
Rops3g01368 665 PRINTS FAD-dependent pyridine nucleotide reductase signature 312 330 - -
Rops3g01368 665 PRINTS FAD-dependent pyridine nucleotide reductase signature 251 269 - -
Rops3g01368 665 SMART efh_1 472 500 IPR002048 GO:0005509
Rops3g01368 665 ProSiteProfiles EF-hand calcium-binding domain profile. 468 503 IPR002048 GO:0005509
Rops3g01368 665 PANTHER NADH DEHYDROGENASE 141 665 IPR045024 GO:0003954|GO:0006116
Rops3g01368 665 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 137 497 - -
Rops3g01368 665 Pfam Pyridine nucleotide-disulphide oxidoreductase 146 470 IPR023753 GO:0016491
Rops3g01368 665 Gene3D - 532 665 - -
Rops3g01368 665 Gene3D - 135 498 - -
Rops3g01368 665 SUPERFAMILY FAD/NAD(P)-binding domain 145 364 IPR036188 -
Rops3g01368 665 SUPERFAMILY EF-hand 425 553 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01368 Rops-Chr3 20177345 20188858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01368 90 665 Chloroplast and Mitochondria Gene Families AT4G21490 63.058 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01368 K03885 - gmx:100793566 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01368 3 20177345 20188858 Rops3g01368 3 20177345 20188858 ECH