Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01319 ATGAAGGGATCAGAAGAAAATGACAATGAAGCCATAGAGGTCCCTTATTTCGATTTTGAGAGCATACTAGAAGCTACAGATGACAATGAAGCCATAGAGGTCCCTTATTTCGATTTTGAGAGCATACTAGAAGCTATAGATAACCTCTTTGATGAAAATAAGCTTGGGAAAGGGGGTTATGTGCCAGTTTACAAGGTGATTGACTTAAGCTCCTTTTTACATTTCTTGCCAAACCAAATTTTGGGTAATGTCAAATGGAGATTTTTGTTTCAGGGTAAGCTTCCAGGTGGTCATGATATTGTTATAAAGAGGCTTTCAAGTGTTTCATCACAAGGCTTAAAGGAATTCAAGAATGAGGCTGTTTTGATTGCCAAACTTCAACATCGGAACCTTGTTAGACTCCGGGGCTATTGCACTAAAGGAGATGAAAAAAATTTACTTTATGAATTATATGCCTAA 459 0.3725 MKGSEENDNEAIEVPYFDFESILEATDDNEAIEVPYFDFESILEAIDNLFDENKLGKGGYVPVYKVIDLSSFLHFLPNQILGNVKWRFLFQGKLPGGHDIVIKRLSSVSSQGLKEFKNEAVLIAKLQHRNLVRLRGYCTKGDEKNLLYELYA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01319 152 ProSiteProfiles Protein kinase domain profile. 49 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01319 152 SUPERFAMILY Protein kinase-like (PK-like) 29 151 IPR011009 -
Rops3g01319 152 Gene3D Phosphorylase Kinase; domain 1 28 150 - -
Rops3g01319 152 Pfam Protein tyrosine and serine/threonine kinase 97 150 IPR001245 GO:0004672|GO:0006468
Rops3g01319 152 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01319 Rops-Chr3 19078772 19079230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01319 19 150 Receptor kinase-like Gene Family AT4G04510 40.909 5.68e-25 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01319 PK_Tyr_Ser-Thr 3.4e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01319 - - tpra:123882048 143.28