Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01318 ATGCGATTTGATATAATTCTTGGAATTGCTTGTGGGGTACTTTATCTTCACCAAGACTTAAGACTGAGAATAATTCACAGAGATTTGAAGACCAGCAACATTCTTCTAGATGAGGACATGAAACCAAAATTTCAGACTTTGGATTGGCAAGAATATTTGGAGGCAATGAGACTGAGGGTAGCACCGAGAGGTGGATACATGTCTCCTGAATATGTATTAGATGGACATTTCTCAACCAAATCGGATGTTTTTAGCTTTGGTATAGTCTTGCTTGGGATTATTAGTGGGAAAAAGAACACAGGATTTTATCGGAATAAAGAAATTTCAAGCCTTTTGGGTTATGGCTGGAAACTATGGAAAGAGAACAAGTTGCTGGAATTAATGGATACAACTCTGCATGAAACTTGCAACGCAGACCAATTCATCAGGTATGCTCATATTGGACTGTTGTGCGTCCAAGATGAACCAGATGATCGGCCAAACATGTCAAATATTGTCATAATGCTTGAGAGTGAAACTGCAACCCTTCCAGCCCTTAATGAACCTACCCTTTTTTTTATGTGTAAAGAGCTATTTAGCACAACTTCTTCAAGTCTACAGTTGGAGAGTAGTAATCTAGAATGTCGATAG 630 0.3857 MRFDIILGIACGVLYLHQDLRLRIIHRDLKTSNILLDEDMKPKFQTLDWQEYLEAMRLRVAPRGGYMSPEYVLDGHFSTKSDVFSFGIVLLGIISGKKNTGFYRNKEISSLLGYGWKLWKENKLLELMDTTLHETCNADQFIRYAHIGLLCVQDEPDDRPNMSNIVIMLESETATLPALNEPTLFFMCKELFSTTSSSLQLESSNLECR* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01318 209 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 49 174 - -
Rops3g01318 209 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 183 - -
Rops3g01318 209 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g01318 209 SUPERFAMILY Protein kinase-like (PK-like) 2 198 IPR011009 -
Rops3g01318 209 Gene3D Transferase(Phosphotransferase) domain 1 1 180 - -
Rops3g01318 209 Pfam Protein tyrosine and serine/threonine kinase 4 167 IPR001245 GO:0004672|GO:0006468
Rops3g01318 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01318 Rops-Chr3 19077779 19078615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01318 1 186 Receptor kinase-like Gene Family AT4G23250 51.562 9.61e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g01318 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01318 - - tpra:123882048 256.144