Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01314 ATGAATAATGCTATTTTTCCCATTCCTTGTAGTGCCAAAGTCATCATGGAGGAGTATAGTGGTTTGACCAATAACAATATGGAGGAAATTCTTGGAAATATAGAGGGAATAGAAGAGATCCTATTTGATTATGAGAATGAAGGCAATGAAGATGAATATGGTGAAGAGGAGGATGTGGAGGAATATGTTAAAGAGGAGGAGGTTGTGGGTGTTGATAAGGATGAATTGAGCTATGAAGATAGTCTAATGGATGGCGAAGGTACGATGATAAATGTTGATAGTATTAACGATATTGGGAATTTGGACCTAGTTAACTTTGGTGCACATGAAGTAGTCAATATTGATTTCGCTAGTCTTAAGGTGGCGTTGTTATTCTATATTTTATATGCAAGAGTGAAAGGTTTTGCAGTTAGGAAATCGAAGATGCAGAGGAGTAAAAATGGTGAGATTGTCCAAAAAATATTTGTTTGTAATAGACAGGGATACAAGGAGGATAGAGGATTGACTGTTGAACAACGTAAGAGGAAGGCAAGACTGCAAACTAGATGTGGGTGTGAAGCTCAATTTAAGAAGCGCAAGTTTGAATACTTGTATCAGTCTCTGGAAAGAAAATTTCGAGAACTAGATGATCGGGTTGTAGTGTTGGAGAGCGATACAAAGATGCTGCTCAACGAAGATGTCTGTCATGGTGTGGACTTTGAAATGAAGGAACATGAGAACGATCCCACACACACTTCTTCAGTTAAACATTTTGACGATGCTGTTAATGCAGATTTTGTCATGAACACCGACGGGCATGTTTCGTCGGAATGA 813 0.385 MNNAIFPIPCSAKVIMEEYSGLTNNNMEEILGNIEGIEEILFDYENEGNEDEYGEEEDVEEYVKEEEVVGVDKDELSYEDSLMDGEGTMINVDSINDIGNLDLVNFGAHEVVNIDFASLKVALLFYILYARVKGFAVRKSKMQRSKNGEIVQKIFVCNRQGYKEDRGLTVEQRKRKARLQTRCGCEAQFKKRKFEYLYQSLERKFRELDDRVVVLESDTKMLLNEDVCHGVDFEMKEHENDPTHTSSVKHFDDAVNADFVMNTDGHVSSE* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01314 270 Coils Coil 198 218 - -
Rops3g01314 270 Pfam FAR1 DNA-binding domain 125 192 IPR004330 -
Rops3g01314 270 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 51 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01314 Rops-Chr3 18937506 18943891 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops3g01314 FAR1 3.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01314 - - tpra:123913749 122.864