Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g01309 | ATGTTAAACACCAAAGGAGAGACCATAAGGATAATTATCCTTAACTGGTCTTGTAGCCACATGCTGTCTATTTTCCTTTTGTGTTCATTCTTTTTCACCTTTAAGCATTGCTCAGCTAGAGATAGCTTAACCATTAACAACTTGTTACAAGATGGGGGAGAGGATACTCTCATTTCAGCAGGAGAAAATTTTGAACTAGGATTTTTCACTCCTAATGGAAGTTCAAGTGGCAGAAGATATGTGGGAATATGGTACTACAACTTGACTCCAAAAACAGTTGTGTGGGTTGCTAACAGAGATATCCCTCTTCTAGATTCTGGGGGTGCTTTTGGCATTGAAGAGGATGGGAATCTTAAGGTTTTGGACAAAAGTGGGAAATCCTATTGGGGGACAAAGCTTGAAAGATCATCTTCACAGCACAAGACATTAAAACTATTGGACAGTGGGAACCTTATTGTAAGTGACGAAGAGAAAGGAAATCATACAGTGAAGATTCTGTGGCAGAGTTTTGCTAATCCAACAGATACATTTCTTCCAGGGATGAAAATGGATGGCAAATTAGCATTAACTTCATGGAGAAGTTATGATGATCCAGCACCAGGGAACTTCTCATTTGAGCAAGATCAAGGAGAGAATCAGTATATCATATGGAAGAGATCCGTGAGGTATTGGAAAAGCAGTGTATTAGGTAAATTTGTTGGAACTGGTGAGATGTCTTCAGCAATATCTTACTTTTTGTCTAATTTCACCATGAGAATATCCCCAAACAACACTGTTCCCTTTCTCACTTCATCACTATATAGTGACACAAGGATGGTCATGACTTACTGGGGTCAACTTAAGTATCTCAAGATGGATTCAGAGAAAATGTGGTTGTTAGTTTGGGTAGAGCCTAGAGATAGATGCAGTGTGTTCAATGCTTGTGGAAACTTTGGAAGCTGTAATAGCAAGTATGTTTCTATGTGCAAGTGTTTGCCTGGATTCAAGCCTAATTCTCTTCAAAGTTGGAATGCTGGAGATTTTTCAGGTGGTTGTAGCAGGAAAACAAATGTGTGTAGTGAGGATGCTAAGAGTGATACATTTTTGAGCTTAAAAATGATGAAAGTAGGGAATCCAGATGCTCAATTTAATGCTGAAAATGAAGAGGAATGCAAGTTAGAGTGCCTCAACAATTGTCAATGCTATGCTTATTCATATGAAGAGATTGAAAAGGAAAGGAAGGGTGATGGTGCTAATGCAATTTGCTGGATTTGGTCTCAGGACTTGAACAATCTTGAAGAAGAGTATGATGGTGGGTGTGACCTGCATGTTCGAGTTTCATTTTCTGATATAGAATCCACTGGGAGCAGTTGTGGGACTTGTGGCACAAACTTCATCCCATATCCCCTTAGTACAGGACCTAATTGTGGTGACCCCATGTACTTCAATTTTCACTGCAACACTTCCACTGGTGAGCTTGACTTTGAGACTCCTGGGGGCACCTATCAAGTGATAAGCATAAACCAAGAAACACAAAAATTCTTGATCCACAGAAAAAATGTACTTAATTGTGAGGGTCAAAGTTCAAGGGACAAGCTTCTGATTCTCAACCAGTCATCTCCATTTCATCTTACTGGCAATTGCTATGCTGATCCAAGCACTTTTAGTTCTAATGCTCCCATGAAACATGGAATAGAAATAGAACTAAGTTGGGACCCACCATTGGAGCCAATTTGTTCTTCATTGTTGGACTGCAAGGACTGGCCAAATTCAACTTGCAATACTACCAGTGATTGGAAGAAGAGATGCCTTTGCAATAAAAACTTCCTTTGGGATGGCTTGAAATTAAATTGTACTCTAGAACATGATAGTTACCAAACAGAAAGGCATCTGTCTTCACCAAAGACCATTGTAGTCACTTTTACAACTGTGATTTTCTTAATTATTCTCTCCAGTACTGTTACATGTATTTACTTAAGGAAAAGGAGACAGGCCAAAACACAAGAAAGCAGGGGATATGTTCAGAAAAACTCAGGGATAAACTTGTATGACAGTGAGAGACATGTTAGAGACTTGATTGAATCTGGTAGGTTCAAAGAAGAGGATGCACAGGCCATAGATATTCCGCATTTTCATTTGGAAAGCATATTTGATGCTACTAATAATTTTGCAAATGCAAACAAGCTTGGACAAGGGGGATTTGGTCCTGTCTACAAGGGAAAATTTCCTGGAGGACAAGAAATAGCAGTAAAGAGACTTTCAAGTTGTTCTGGACAAGGTTTAGAAGAGTTTAAAAATGAAGTTGTGTTGATTGCCAAGCTTCAACATCGAAACCTAGTTAGACTTCTGGGTTACTGTGTGGAAGGAGATGAAAAGATGCTAGTATATGAATATATGCCAAATAGAAGCTTGGATGCATTCATTTTTGACCGGAAGCTGTGTGTTCAATTAGACTGGGATATGCGCTTCAAGATTATTTTGGGGATTGCTCGAGGGCTTCTTTATCTACACGAAGATTCTAGGTTGAGGATTATTCATAGAGACTTGAAAGCAAGTAATATTCTACTAGATGAAGAGAAGAATCCTAAAATCTCAGACTTTGGCTTAGCAAGGATATTTGGAGGAAAAGAAACAGTAGCAAACACAGAAAGAGTGGTTGGAACTTATGGATATATGTCTCCAGAGTATGCACTTGATGGACATTTTTCAGTTAAGTCTGATGTCTTTAGCTTTGGTGTGGTGGTACTTGAGATTATTAGTGGAAAAAGGAACACTGGATTTTATCAAGCTGAACATGAATTGAGTCTTCTAGGATATGCATGGCATTTGTGGAAAGTTGGCAGGGCATTGGACTTCATGGACCAGACACCAAGTCAAACCTGCAATGCAAATGAATGCTTGAAATGTGTGAATGTGGGGCTCTTATGCTTACAAGAAGATCCAAATGAACGTCCCACTATGTCAAATGTGGTTTTCATGCTTAGCAGTGAATCTAATACTCTTCCAACTCCTAAGGAACCAGCTTTTGTTACAAGGAGATGCCCTTCAAGTAGAGCATCCACTTCCAGCAAAATGGAAACTTTTTCACGTAATGAATTGACCGTCACTTTAGAAAATGGCAGGTAG | 3105 | 0.3919 | MLNTKGETIRIIILNWSCSHMLSIFLLCSFFFTFKHCSARDSLTINNLLQDGGEDTLISAGENFELGFFTPNGSSSGRRYVGIWYYNLTPKTVVWVANRDIPLLDSGGAFGIEEDGNLKVLDKSGKSYWGTKLERSSSQHKTLKLLDSGNLIVSDEEKGNHTVKILWQSFANPTDTFLPGMKMDGKLALTSWRSYDDPAPGNFSFEQDQGENQYIIWKRSVRYWKSSVLGKFVGTGEMSSAISYFLSNFTMRISPNNTVPFLTSSLYSDTRMVMTYWGQLKYLKMDSEKMWLLVWVEPRDRCSVFNACGNFGSCNSKYVSMCKCLPGFKPNSLQSWNAGDFSGGCSRKTNVCSEDAKSDTFLSLKMMKVGNPDAQFNAENEEECKLECLNNCQCYAYSYEEIEKERKGDGANAICWIWSQDLNNLEEEYDGGCDLHVRVSFSDIESTGSSCGTCGTNFIPYPLSTGPNCGDPMYFNFHCNTSTGELDFETPGGTYQVISINQETQKFLIHRKNVLNCEGQSSRDKLLILNQSSPFHLTGNCYADPSTFSSNAPMKHGIEIELSWDPPLEPICSSLLDCKDWPNSTCNTTSDWKKRCLCNKNFLWDGLKLNCTLEHDSYQTERHLSSPKTIVVTFTTVIFLIILSSTVTCIYLRKRRQAKTQESRGYVQKNSGINLYDSERHVRDLIESGRFKEEDAQAIDIPHFHLESIFDATNNFANANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDAFIFDRKLCVQLDWDMRFKIILGIARGLLYLHEDSRLRIIHRDLKASNILLDEEKNPKISDFGLARIFGGKETVANTERVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQAEHELSLLGYAWHLWKVGRALDFMDQTPSQTCNANECLKCVNVGLLCLQEDPNERPTMSNVVFMLSSESNTLPTPKEPAFVTRRCPSSRASTSSKMETFSRNELTVTLENGR* | 1035 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g01309 | 1034 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 837 | 849 | IPR008271 | GO:0004672|GO:0006468 | |
Rops3g01309 | 1034 | Pfam | Protein tyrosine and serine/threonine kinase | 719 | 985 | IPR001245 | GO:0004672|GO:0006468 | |
Rops3g01309 | 1034 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 792 | 995 | - | - | |
Rops3g01309 | 1034 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 142 | 1012 | - | - | |
Rops3g01309 | 1034 | Gene3D | - | 36 | 171 | IPR036426 | - | |
Rops3g01309 | 1034 | Pfam | D-mannose binding lectin | 92 | 185 | IPR001480 | - | |
Rops3g01309 | 1034 | Pfam | PAN-like domain | 355 | 424 | IPR003609 | - | |
Rops3g01309 | 1034 | SMART | blect_4 | 46 | 173 | IPR001480 | - | |
Rops3g01309 | 1034 | Gene3D | Transferase(Phosphotransferase) domain 1 | 792 | 999 | - | - | |
Rops3g01309 | 1034 | ProSiteProfiles | Protein kinase domain profile. | 716 | 1002 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g01309 | 1034 | CDD | B_lectin | 46 | 173 | IPR001480 | - | |
Rops3g01309 | 1034 | CDD | STKc_IRAK | 722 | 987 | - | - | |
Rops3g01309 | 1034 | Pfam | S-locus glycoprotein domain | 231 | 331 | IPR000858 | GO:0048544 | |
Rops3g01309 | 1034 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 35 | 170 | - | - | |
Rops3g01309 | 1034 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 93 | 198 | IPR036426 | - | |
Rops3g01309 | 1034 | SMART | ntp_6 | 356 | 439 | IPR003609 | - | |
Rops3g01309 | 1034 | Gene3D | Phosphorylase Kinase; domain 1 | 680 | 791 | - | - | |
Rops3g01309 | 1034 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 | 681 | 791 | - | - | |
Rops3g01309 | 1034 | ProSiteProfiles | Bulb-type lectin domain profile. | 42 | 166 | IPR001480 | - | |
Rops3g01309 | 1034 | ProSiteProfiles | PAN/Apple domain profile. | 352 | 440 | IPR003609 | - | |
Rops3g01309 | 1034 | SMART | serkin_6 | 716 | 986 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g01309 | 1034 | CDD | PAN_AP_plant | 352 | 440 | - | - | |
Rops3g01309 | 1034 | SUPERFAMILY | Protein kinase-like (PK-like) | 700 | 1020 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g01309 | Rops-Chr3 | 18861170 | 18866830 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g01309 | 709 | 1002 | Receptor kinase-like Gene Family | AT4G23230 | 61.905 | 1.71e-124 | 392 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Rops3g01309 | PK_Tyr_Ser-Thr | 3.3e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g01309 | - | - | gmx:100775297 | 1845.86 |