Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01299 ATGGAATTGACAAGACCCGGTTATGCGGTTGTTTATGTCATTCTCCTTTGCGCTTTGGCACAAGGGGGCTCAGAGGGAAAGAGGGGGAAGGACGAGGATTTTTCTAGACATGGTGGAGCTTTGTCAATGTCCCTTCATATACATGGAAAACAGGCAGAGAATGTGTGGAAACATTGCAGGAAAGAATTGACAGAGAGGAGCAATGATATTAAAGATTTTGACTGGCATCCACTGGGAGGGAGCAGTGACATGGGGTCTATTCTTTCAATAGAAAATAACATACACAAAACAGCCAAGTCTCTGCCTCCCCACCTGAAAAGAAAAGTTTTGGACTGCATAAGAACAAGCATTCCTGCTCCTATTTCTGGAGAGAAGGTTGGCTCTAGATATTTGTTGAAAAAGCATTCTAGATCAACCTTGGGTTTGGAAAATGGTCATCATGAAAGACATTTGATTGCTGATTCACCACATGATCAAATGACACCAAGTCCTGCTGCTACTGTTCCATCCCCAGGGCACGCACTTGGATCACCAAGTCCTGATGCTACTGTTCCATCCCCAGGGCATGCACTTGGATCACCAAGTCCTGACGACTCAACATCAGCAAGTTCTCATCCATCACCAACTCCAGGACCAATTGCACATGATGATTTACCATTCCCTCCAGATATGTTTACGAAATTTCCACCACCACCACATCTACCTCATCCTCCTTCTGAAATTCTAAAACCTATAACATATGCTCCTATTCCTTCACCTCCTGACAATGATGGCAAACAGCATAAAACAATTATTGTAGCTGCCACTGTATCAGGAATTATAGTTTTGATAGGCTTGTCCCTATGTTATCGTGAGGTCAGAACCAAGAAAGTTGACAAAGACGACGGCCCTTTACTCGTATTAACCTCAAGTGATTATCCAGAAGGTTCTCAAAAGGTTGTTCGTTTGGGAGATGCTGATAAGCAAGAATCTGGTATTAACAATGGAAAGAACCCTGCTGATATTAGAACTTGGTCCATTAAGGGCGGAGATAACAAGACCTCACTTGTTGAGACAACATCATCAAAAGATATGGGACAAGTACCAGTGCCTCCTAGTGGAAAACCAGCCCCTCCACCACCTGGGCCACCCCCGCCACCGCCTCCACGGCCACCTGCTCTTGCACCTCGTCCTCCACCACCTCCAAGAGCTGCTAATCCTCCACCTGCTCCTCCCAAGCCAGGTAGAAACCAAGGACCACTTCATTCTAAAGAGGGAAGTTCTGGTGAGGGTGATGCTCCAAAACCAAAACTAAAGCCTTTTTTCTGGGATAAGGTTGCTGCAAAACCTGATCAAGCAATGGTGTGGCATGAGATCAGTGCAGGGTCATTCCAGTTCAATGAGGAAATGATGGAGTCTTTATTTGGATGCACAACCCATAACAGAAATGAACGCAAAAAAGATTCACCTTCTGTAGATACTTCAGTAAAGTATATTCAGATTATTGACCCTAGAAAAGCTCAGAATTTAGCAATTCTTTTACGAGCTTTGAATGTGACAACAGCTGAAGTTATTGATGCTCTTAAAGAAGGTAACGAGATTCCTGTGGAGCTCATCCAGACATTGTTGAAGATGGCACCGACACAAGAAGAGGAACTGAAGCTTAGGATATTCTCGGGAGACCTGTCTCTACTAGGCCCTGCAGAGAGGTTTCTCAAAGTCTTGGTCGAAATTCCATTCGCTTTCAAACGCCTTGAATCCCTGATGTTCATGTTTATGCTTCGAGAAGAGGCCTCAAGCATTAGAGAGTCATTTAAAACATTAGAGGTTGCTTGCGATGAACTCAGAAAAAGCAGGTTATTCTTAAAATTACTAGAAGCAGTTCTCAAAACTGGGAATCGCATGAATGATGGTACCTATCGTGGTGGTGCTCAAGCATTTAGACTTGACACACTTCTGAAACTATCAGATGTTAAAGGAACCGACGGCAAGACAACACTGTTACACTTTGTGGTTCGGGAAATCATACGTTCAGAAGGGATAAGAGCTGTGAGAACTGAGAGAGCAAGTAGAAGCATTTCCAGCGTGGGAACAGAAGATCTTGATGATGGCAATGAAGAATCTGAAGAACACTATCGATGCCTTGGCCTTCAAGTAATTTCAAGCCTAAGCATTGAACTTGAGGATGTGAAAAAAGCAGCACTTATAGATGGAGATGCACTAAGCAGTGCAGTGTTAAAACTTGGCCACTCATTAATAAAGACACAAGAATTTCTAGACACTGATATGAAGAATCTTGAAGAAGAGAGTGAATTCAAACATTGCACTGAAACGTTTATGGAGAAAGCAAGAGAAGAGGTGACATGGCTTGTGGAGGAAGAAAAGAGGATAATGGCATTGGTTAAGAGCACAGCAGATTATTTCCATGGGAATTCAGGAAAAGATGAAGGGTTGCGTTTGTTTTCGATTGTGCGTGATTTCTTGATAATATTAGACAAAGTGTGCAAAGAAGTGAAGGACAAAACTATGAAGTCAAAGAAGGCTAATAATTGCAAGAAAGAGGCACCATCAGTGCCATCTTCTCCTGATACTCGTCAACAGTCATCACCATCATCACCTTCTGATCTACATAGGTGGGTGTTTCCGGCAATTGCAGGGCGGAGAGTGGATTATTCAAGCTCTGATGATGATGATGATGACGATAAGGACTTTTCTACATAG 2700 0.4315 MELTRPGYAVVYVILLCALAQGGSEGKRGKDEDFSRHGGALSMSLHIHGKQAENVWKHCRKELTERSNDIKDFDWHPLGGSSDMGSILSIENNIHKTAKSLPPHLKRKVLDCIRTSIPAPISGEKVGSRYLLKKHSRSTLGLENGHHERHLIADSPHDQMTPSPAATVPSPGHALGSPSPDATVPSPGHALGSPSPDDSTSASSHPSPTPGPIAHDDLPFPPDMFTKFPPPPHLPHPPSEILKPITYAPIPSPPDNDGKQHKTIIVAATVSGIIVLIGLSLCYREVRTKKVDKDDGPLLVLTSSDYPEGSQKVVRLGDADKQESGINNGKNPADIRTWSIKGGDNKTSLVETTSSKDMGQVPVPPSGKPAPPPPGPPPPPPPRPPALAPRPPPPPRAANPPPAPPKPGRNQGPLHSKEGSSGEGDAPKPKLKPFFWDKVAAKPDQAMVWHEISAGSFQFNEEMMESLFGCTTHNRNERKKDSPSVDTSVKYIQIIDPRKAQNLAILLRALNVTTAEVIDALKEGNEIPVELIQTLLKMAPTQEEELKLRIFSGDLSLLGPAERFLKVLVEIPFAFKRLESLMFMFMLREEASSIRESFKTLEVACDELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVREIIRSEGIRAVRTERASRSISSVGTEDLDDGNEESEEHYRCLGLQVISSLSIELEDVKKAALIDGDALSSAVLKLGHSLIKTQEFLDTDMKNLEEESEFKHCTETFMEKAREEVTWLVEEEKRIMALVKSTADYFHGNSGKDEGLRLFSIVRDFLIILDKVCKEVKDKTMKSKKANNCKKEAPSVPSSPDTRQQSSPSSPSDLHRWVFPAIAGRRVDYSSSDDDDDDDKDFST* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01299 899 Gene3D Formin, FH2 domain 427 858 IPR042201 -
Rops3g01299 899 MobiDBLite consensus disorder prediction 316 431 - -
Rops3g01299 899 SUPERFAMILY Formin homology 2 domain (FH2 domain) 377 840 - -
Rops3g01299 899 PANTHER FORMIN-RELATED 164 881 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Rops3g01299 899 MobiDBLite consensus disorder prediction 341 360 - -
Rops3g01299 899 Pfam Formin Homology 2 Domain 425 824 IPR015425 -
Rops3g01299 899 MobiDBLite consensus disorder prediction 364 409 - -
Rops3g01299 899 MobiDBLite consensus disorder prediction 838 871 - -
Rops3g01299 899 PRINTS Proline rich extensin signature 360 385 - -
Rops3g01299 899 PRINTS Proline rich extensin signature 185 197 - -
Rops3g01299 899 PRINTS Proline rich extensin signature 164 180 - -
Rops3g01299 899 PRINTS Proline rich extensin signature 210 231 - -
Rops3g01299 899 PRINTS Proline rich extensin signature 238 254 - -
Rops3g01299 899 ProSiteProfiles Formin homology-2 (FH2) domain profile. 421 850 IPR015425 -
Rops3g01299 899 MobiDBLite consensus disorder prediction 212 236 - -
Rops3g01299 899 MobiDBLite consensus disorder prediction 154 236 - -
Rops3g01299 899 SMART it6_source 421 839 IPR015425 -
Rops3g01299 899 MobiDBLite consensus disorder prediction 847 868 - -
Rops3g01299 899 MobiDBLite consensus disorder prediction 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01299 Rops-Chr3 18713240 18719896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01299 421 832 FH2 protein (formin) Gene Family AT5G67470 49.881 1.82e-119 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01299 - - psat:127086789 804.668