Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01284 ATGGGCGATGGAGGCGTGGCGTGCATGCCTTTGCAGCAGCAGCAGCATGTTGTGGAGAGGTTGCCGAATGCAGCAGCGGAGAATGCACTTTGCGGTGGCAATAATGGGAACGGGTTCAGTTCTGAAGTGCCCAAGGTTGCTGACAAGAAAAAGAAAAAGAAAAAGAAGGTGGTGAAGGTGAAGGTGAAGAAGAAAGTGGCACCTGCAGCAACGGCCAAGAAGGGTGGAGCGGTGAAGGGTGAATTGGCAGTGGACAGAGTGAGCAGCAGGGTCAGCAATGATGTTGAGGAAGAAGTGGAAGAGGGTGAATTGGGGACTTTGAAGTGGCCGAGGAGTGAACTGGAGAATGGAGAGTTTGTGCCGGAGAATTCGCCACCGCCGCGGAGAAGTGAAATTGAGAATGGGGAGATTGTAAGTGAGAGGTGGAAGAAAGGGGAGGTGGAAAAGGGACAGTTTGTTTCTGAAAAATTGAGAAAGGAGGAAGTGGAGAAAGGGGAGATAGTTTCTGAGAAGGGTAGGAGAAGAGAAGTTGAGAAAGGGGAATATGGGCCATGGAAAGGTGGTATAAAGGATGATATTGAGAAGGGAGAATTCATTCCAGATAGGTGGCATAGGGGAGACACGGGGAAGGATGATTATGGTTACAGTAGAATCCGCAGGTACCAGTCAGTTAGGGACAAAGGGTGGAGAAATGAACGTGAATGTACACCAACTTCTGGGAGATATACAGGCGATGAGTATTTTAAGAAGAAGGAATTGGATAGAAGTGGGAGTCAGTTTGCTAAAAGTGCTTCCAGGTGGGAGAATGGACAAGAGAGAAATGTAAGGATCAGTTCAAAGATTGTGGATGAGGAAAAAAATGAACACAGCAATGGTAGGACTAATACACGGGATTACTCTTCTGGTCGGTTAAAGAGGCATGGTAATGAATCAGACAGCTGTGAGCGTAAGGAGCATGGAGATTATGCTGGTTTAAAAAGTCGAAGGCTTTCTGATGATAGCTGGCGCCATGTTTATTCAGAGCACTATTCTCGTCTGTCTGTGGATAGATCTTATAGAAATAATTCTTCAAAATTATCAGCGGACAAGTATTCTTCCAGGCATCATGAATCTTCTTTGCCTATCAAATCAGTTCACGATAAGCGTGGATGCAGCCCTGGTCATTCTGAGCGATCCCCAGGTGATCGAGCCAGGTATTATGATCATAAAGGTCAAATGCGTCGATCACCCCATGGCCGTGACAGATCTCCATATAGCCTTGAGAAATCCACGCATGGTCATGAAAGATTCCCATGTGATAGGAATTGGGATAGAAGTCGTCACCATGATCATAAATTGAGAAGTCCTACCCCGCAAGATCGAGGTCAAAACCATGATCGCAGGGACCGAACTCCAAATTTAACAGAGAGATCCCCACTTGATCAAAATAGGCAAATTATTCATCGAGAAACAAGAAGTAAAAAAACTATATCAAGTGAAAAACATAACTCACAATATAGCTGTAAGAATAATGAAGATAAGAACACCCAAAAGGAGTCAAATCTTTCAGATATAGAATCTCAAGGTGAAAGAAATGTGCATGATGTCAATGGGTCGATTGAGAAAGGTGTCTGCAGTGAACCTGAAAAGGAACAACAGTCCTGCAGCCCAACTGTAAGCCGCAAAGACTCTCCTTGCTTGCAGCCACCTCCCGAGGAGCTGCCTTCTATGGAAGAAGATATGGACATATGTGATACCCCTCCACATGTTCCTGTGGCGGCAGATTCATCATCAGGGAAATGGTTTTACCTTGATTATGGTGGTGTAGAACATGGACCTTCTAAGTTATCTGAAATCAAGATCCTTGTTGATGATGGTGTGCTAATGTCAGATCACTTTATTAAGCACATAGATAGCAACAGGTGGTTCACTGTTGAAAATGCAGCATCACCATTGGTAGCTCATAGTTTTCCATCTGTTGTGTCAGACACTGTAACCCAGCTGGTAAACCCTCCAGAAGCTCCTGGTAATCTTTTGGCAGATACTGGAGATATGCTTCAATCTGGTCCTGAGAATAATCAGGAAATGCTGGCCCCTTTGCTGCAACCAATGGTATGCCCTGATGACAGTGTGCTGACATCTGAACTGTTGGAGGACCTCCACATCGATGAAAGGGTTGGAGTTCTGTTAGAGGGTTATGATGTCATTCCTGGAAGAGAGCTTGAGGCAATAAAAGAAGCTTTGCAAATGAATTTTGAATATGCAAAATGGGAGGGATTGGGAAACTATGAAGGTTTTCCTTGGCATGATACTTACCTGAGCATGGAGCGTGATTCAAGAATTGATTTAGCATCAAAAGAATATGAATCACAGTTATGTATGCCCTCAGACAAGGATAATGGATTTACTCTAGGTGTCCCTGGTGACTGGTTTTCTGCTCGATGGTCATGCAAAGGTGGTGACTGGAAGAGGAATGATGATTCCCAAGATAGATATTGTAAGAAGAAACTTGTCCTAAATAATGGGTTTCCATTATGTCAAATGCCTAAGTCTGGATGTGAAGATCCTCGTTGGCCTAGAAAAGATGACTTATATTATCCTTCTCCCAGCAGTAGGCTTGATCTTCCTCTTTGGGCTTTTTGTACTGATGAGAGGGTTGATTGTAGCAGTGCTATGAGCAGACCAGTTCAAAGTAAGCTTGCTTCTGTTAGAGGAGTGAAAGGAAATGTTCTTTCAGTGGTCAGGATAAATGCATGTGTTTTCAAGGACCAGGGATCATTGTTCTCTGAGTCACACCACAAGACCCGAGGCAAGGATAGATATCATTCAAGGTCAACTCGGCCTTTCTCTTCAACCAGTGATAGCAAGAGATCATCAACTGAAGAAGATTCTCAGTCTAGGGCTGTTAATAATCAAGGTTCTCAAGGCTCTTGCAGGAGCATGGAATTCGTTAATATTCCTAGGGACCGTCTTTGTACTGTCCACGACTTCCAGTTACATTTGGGTGACTGGTATTATCTTGATGGTTCAGGGCGCAAAAGAGGGCCTTCATCATTTTCAGAGCTACAGCTTTCAGTCGACCAGGGAATTATAAAAAAGCATAGCAGTGTGTTCAGGAAATGTGATAAACTCTGGGTTCCTGTTACATCTTCCACAGAAACTTTTGATGCCAGTCTCAGGAGCCACCGAGCAAGCAGTTCAGTGTCTGGACATCCATCATTGCAAACTCAAGGTGTTCCAATTGTTGAACCGTACTCAAAGTCAAATTTGTTTAACAGCTTACACCCTCAGTTTGTTGGTTATACTCGTGGGAAACTACATGAATTAGTGATGAAATCATATAAGAGCCGGGAATTTGCTGCAGTTATAAATGAGGTTTTAGATCCCTGGATCAATGCTAGACAGCCAAAGAAAGAAACTGAGAAACAAATATATTGGAAATCAGAAGGTGATGCACATGTTTCCAAAAGAGCACGGATGCTGGTAGATGATAGTGAAGAAGATAGTGATATCGAAGATGGTGAGAAGGATGAATCCACTTTTGAGGCTCTATGCGGTGATGCTGCTTTCTTTGGAGAAGAAAGTGGTGTTACTGTTTGCAAGGTGGGAAGGTGGGCCGCATTAGATGGTCGAATGTTGGCACGAGTCTTCCACTTTCTGAGGTCTGATTTGAAGTCCCTTGTCTTTGCATCAATGACATGCAAGCATTGGAGAGCGTCTGTAAGGTTTTACAAAGAAGTCTCAAGAACTGTCAATTTATCTTCCCTGGGTCATTCTTGCACTGATTCCACAGTGTGGAACATTGTGAATGCTTATGAAAAAGACAAGATCAAATCTATGATTCTAATGGGTTGCACCAATGTTACTGCTGGCATGCTAGAGAAAATTCTTCTTTCATTTCCTGGATTATCTACAGTAGACATTAGAGGGTGTAGCCAGTTTGGGGAGCTGACTCCTAAATTTACCAATGTGAAATGGATCAAGAGCCGAAGTTCTCGCGTAACCAAAATTGCAGAGGAGCCACATAAAATCAAAAGCCTTAAGCAGATTACTGAGCAAACTTCATCTGTTTCCAAGGCCAGCAGTTTAGGAATTAGGGATGATTTTGCTGAGCTGAAGGATTATTTTGATAGTGTTGATAAGAGAGACACGAAGCAATTATTATTCCGTCGAAACTTGTACAAGCGGTCAAAATTATATGATGCTAGAAAGTCCTCTTCTATTCTATCTAGGGATGCTCGCACAAGACGATGGTCTATTAAGAAATCTGAAAGTGGTTACAAGAGGATGGAGGAACTTCTTGCTTCAAGACTGAGGGAAATTATGAAGGCAAATTCCTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAACAGGTTATTACAGTGGGCATGGGTTGAGCTCTGTCAAGGAGGACATTAGTAGAATGTGTCGTGAGGCAATAAAAGTAAAGAATCGGGGTGATGCAAGTGATATGAATCATGTTATCACATTATTTATTCAGCTTGCAACACGGTTAGAGGAGAGTTCAAAATTTGTGAATGGTAGAGATGCACTATTGAAGTTATGGGAAAATGCCTCACCATCGGTGTTCTGTTCTACTTCCTCTAGGTACAAGAAGAATAGATTGGTGACTGAGAGGAAGTATAGTAGTAGTAATGGAACACATGGTGGTTTGGATAATGGAGAGTATGCTTCGGATAGAGAAATTAGGAGGCGTTTATCAAAATTTAATAAGAAATCAATGTACTCAGAGAGTGAGACATCTGATGACCTTGATACGTCTTATGAAGATGGCAAGAGTGATGGTGCTACTACAATCTCTGACTCTGAAAGTGACCATGAAGTCCATTCAGAAAGTCGAATTGGGGAGGCAAGAGGAGGTGGATACTTCAGTCCTGATGATGCGTTGGATTTCATTACTGATGAACGTGAATGGGGAGCTCGCATGACAAAAGAAAGTCTGGTTCCCCCTGTTACTCGGAAATATGATGTCATTGATCAATATATTCTTGTAGCTGATGAGGAGGATGTGCGAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCAGAGAAGTTGAGTGCGCAAAAGAGTGGCACTGAGGAGTCTGATATGGAACTGCCTGAAGTCAAGGATTACAAACCCAGAAAACAGCTTGGAAATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCCTATACACACAATCTTTTGCTTGATTCTATACCGCAGGAGTTAGATTGGTCGCTACATGAGAAGCATTTGTTTATAGAAGACATGCTACTTCGGACTTTGAATAAACAAGTTAGGCATTTTACTGGAACTGGAAGCACCCCAATGAGCTACCCTTTGCTGCCTGTCATTGAAGAAATTGAAAGGTGTGCAGAGGAGCACTGTGATGCTAGGATGGTGAGAATGTGTCAAGGTATCCTAAAAGCTATAGACAGTCGTCCTGATGACAAATATGTAGCTTATAGAAAGGGACTTGGTGTTGTTTGCAACAAGGAAGAAGGCTTTGGTGAAGATGATTTTGTTGTGGAGTTTTTAGGAGAGGTGTATCCTGTGTGGAAGTGGTTTGAGAAACAGGATGGGATTCGATCTCTGCAGAAAAATAGCAAAGAGCCAGCACCAGAATTTTACAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTACGACTTAGTTGTTGTTGATGCCATGCACAAGGCTAACTATGCCAGTCGGATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTTGATGGTCATTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTTGATTACAATTCTGTTACGGAGAGCAAGGAGGAATATGAAGCATCAGTTTGTTTGTGTGGAAGCCAAGTTTGCCGTGGGAGCTATCTAAATCTGACCGGTGAAGGGGCTTTCCAAAAGGTACTGAAGGAGTGGCATGGAATTCTTGATCGTCATTATTTGATGCTAGAAGCTTGTGAATTAAACTCGGTTTCTGAAGAGGACTATAATGACCTGGGAAGAGCTGGTTTAGGCAGTTGTTTACTTGGAGGCCTGCCAGATTGGCTAGTTGCGTATGCAGCTCGCCTTGTGAGATTTGTCAATTTTGAAAGAACAAAACTTCCTGAGGAAATTCTGAAGCATAATTTGGAAGAAAAAAGAAAATATTTTTCGGATATATGTCTTGAAGTTGAGAGGAGTGATGCAGAGGTTCAGGCTGAGGGTGTATACAACCAGAGGCTTCAGAATCTTGCAGTCACTCTAGATAAGGTAAGGTATGTTATGAGATGTCTTTTTGGTGATCCACTGAAAGCTCCACCTCCTCTTGAGAAGCTCAGTCTTGAAGCAGTTGTTTCCTTCCTCTGGAAAGGAGAGAATTCATTTGTTGAGGAGCTTCTTCAGTGTCTGGCTCCTCATGTGGAAGAGTCTATCTTGAATGATCTCAAGTCCAAAATTCATGCTCGTGATCCTTCAAGTTCTGGAGATATTAGAAAAGAAGTTCAGAAATCTCTGTTGTGGTTGAGGGATGAGGTTCGAAATCTTCCTTGTACAGACAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTTTTTAGAATACGGGATTATCAAACTGTTACTTCGCCACCTGTTTATATTAGTCCACTTGACTTAGGTCCTAAGTATGCTGACAAGTTGGGAGCAGGATTTCAGGAGTATCAGAAAATATATGGTGAAAATTATTGTTTAGGGCAGCTGATTTTTTGGTATAATCAGAGTAATGTGGAGCCAGATTGTACCTTGGCTAGAGCCAGCAGGGGTTGCTTATCATTACCTGACATCACTTCCTTTTATGCCAAGACTCAGAAGCCTTCACGGCATCATTTTTATGGTCCAAGGACTGTCAGATCTATGCTGGCAAGAATGGAGAAACAGCCCCAGAAACCTTGGCCCAAAGACCAGATATGGTCATTCAAAAATTCTCCGAAATTTTTTGGTAGCCCAATGTTAGATGCTGTAATTAATAACTCTCCACTGGATAGGGAGATGGTTCATTGGTTGAAGCACAGACGTGTATTCCAGGCCATGTGA 7134 0.4254 MGDGGVACMPLQQQQHVVERLPNAAAENALCGGNNGNGFSSEVPKVADKKKKKKKKVVKVKVKKKVAPAATAKKGGAVKGELAVDRVSSRVSNDVEEEVEEGELGTLKWPRSELENGEFVPENSPPPRRSEIENGEIVSERWKKGEVEKGQFVSEKLRKEEVEKGEIVSEKGRRREVEKGEYGPWKGGIKDDIEKGEFIPDRWHRGDTGKDDYGYSRIRRYQSVRDKGWRNERECTPTSGRYTGDEYFKKKELDRSGSQFAKSASRWENGQERNVRISSKIVDEEKNEHSNGRTNTRDYSSGRLKRHGNESDSCERKEHGDYAGLKSRRLSDDSWRHVYSEHYSRLSVDRSYRNNSSKLSADKYSSRHHESSLPIKSVHDKRGCSPGHSERSPGDRARYYDHKGQMRRSPHGRDRSPYSLEKSTHGHERFPCDRNWDRSRHHDHKLRSPTPQDRGQNHDRRDRTPNLTERSPLDQNRQIIHRETRSKKTISSEKHNSQYSCKNNEDKNTQKESNLSDIESQGERNVHDVNGSIEKGVCSEPEKEQQSCSPTVSRKDSPCLQPPPEELPSMEEDMDICDTPPHVPVAADSSSGKWFYLDYGGVEHGPSKLSEIKILVDDGVLMSDHFIKHIDSNRWFTVENAASPLVAHSFPSVVSDTVTQLVNPPEAPGNLLADTGDMLQSGPENNQEMLAPLLQPMVCPDDSVLTSELLEDLHIDERVGVLLEGYDVIPGRELEAIKEALQMNFEYAKWEGLGNYEGFPWHDTYLSMERDSRIDLASKEYESQLCMPSDKDNGFTLGVPGDWFSARWSCKGGDWKRNDDSQDRYCKKKLVLNNGFPLCQMPKSGCEDPRWPRKDDLYYPSPSSRLDLPLWAFCTDERVDCSSAMSRPVQSKLASVRGVKGNVLSVVRINACVFKDQGSLFSESHHKTRGKDRYHSRSTRPFSSTSDSKRSSTEEDSQSRAVNNQGSQGSCRSMEFVNIPRDRLCTVHDFQLHLGDWYYLDGSGRKRGPSSFSELQLSVDQGIIKKHSSVFRKCDKLWVPVTSSTETFDASLRSHRASSSVSGHPSLQTQGVPIVEPYSKSNLFNSLHPQFVGYTRGKLHELVMKSYKSREFAAVINEVLDPWINARQPKKETEKQIYWKSEGDAHVSKRARMLVDDSEEDSDIEDGEKDESTFEALCGDAAFFGEESGVTVCKVGRWAALDGRMLARVFHFLRSDLKSLVFASMTCKHWRASVRFYKEVSRTVNLSSLGHSCTDSTVWNIVNAYEKDKIKSMILMGCTNVTAGMLEKILLSFPGLSTVDIRGCSQFGELTPKFTNVKWIKSRSSRVTKIAEEPHKIKSLKQITEQTSSVSKASSLGIRDDFAELKDYFDSVDKRDTKQLLFRRNLYKRSKLYDARKSSSILSRDARTRRWSIKKSESGYKRMEELLASRLREIMKANSCDFFVPKVAEIEAKMKTGYYSGHGLSSVKEDISRMCREAIKVKNRGDASDMNHVITLFIQLATRLEESSKFVNGRDALLKLWENASPSVFCSTSSRYKKNRLVTERKYSSSNGTHGGLDNGEYASDREIRRRLSKFNKKSMYSESETSDDLDTSYEDGKSDGATTISDSESDHEVHSESRIGEARGGGYFSPDDALDFITDEREWGARMTKESLVPPVTRKYDVIDQYILVADEEDVRRKMRVSLPDDYAEKLSAQKSGTEESDMELPEVKDYKPRKQLGNEVIEQEVYGIDPYTHNLLLDSIPQELDWSLHEKHLFIEDMLLRTLNKQVRHFTGTGSTPMSYPLLPVIEEIERCAEEHCDARMVRMCQGILKAIDSRPDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKEPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKEWHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFVNFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCLFGDPLKAPPPLEKLSLEAVVSFLWKGENSFVEELLQCLAPHVEESILNDLKSKIHARDPSSSGDIRKEVQKSLLWLRDEVRNLPCTDKCRHDAAADLIHIYAYTKYFFRIRDYQTVTSPPVYISPLDLGPKYADKLGAGFQEYQKIYGENYCLGQLIFWYNQSNVEPDCTLARASRGCLSLPDITSFYAKTQKPSRHHFYGPRTVRSMLARMEKQPQKPWPKDQIWSFKNSPKFFGSPMLDAVINNSPLDREMVHWLKHRRVFQAM* 2378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01284 2377 Pfam SET domain 1896 1951 IPR001214 GO:0005515
Rops3g01284 2377 MobiDBLite consensus disorder prediction 85 136 - -
Rops3g01284 2377 Gene3D SET domain 1787 1982 IPR046341 -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 163 193 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 277 318 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 228 318 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 1579 1627 - -
Rops3g01284 2377 Coils Coil 501 521 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 542 556 - -
Rops3g01284 2377 ProSiteProfiles SET domain profile. 1812 1951 IPR001214 GO:0005515
Rops3g01284 2377 SUPERFAMILY SET domain 1826 1974 IPR046341 -
Rops3g01284 2377 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1962 2377 IPR045606 -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 359 573 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 1605 1620 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 925 970 - -
Rops3g01284 2377 CDD SET_SETD2-like 1825 1973 - -
Rops3g01284 2377 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 161 2377 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 499 530 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 1579 1596 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 362 468 - -
Rops3g01284 2377 SMART set_7 1817 1957 IPR001214 GO:0005515
Rops3g01284 2377 MobiDBLite consensus disorder prediction 32 58 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 258 276 - -
Rops3g01284 2377 MobiDBLite consensus disorder prediction 475 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01284 Rops-Chr3 18620857 18636579 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Rops3g01284 SET 4.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01284 K22748 - gmx:100781921 3856.6