Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01271 ATGTGCAAAGGTGTAGAAGAGGTTGTTTCATTTGGTGCAACAAGAGGTTCAACATCTTGTGAGCTATGTGGGTTGCAAGCTTCATTGTATTGCCATGCTGATGATGCGTATTTATGTAGAAAATGTGACAAATGGGTTCACAAAGCCAATTTTTTGGCATTTAGACACATAAGGTGCTTTTTGTGCAACACATGTAAGAACCTTACAAGGAGATATCTCATTGGAGCCTCACTAGAGGTGGTTCTTCCAGCCACCGTAAGCTGGAACTAG 270 0.4148 MCKGVEEVVSFGATRGSTSCELCGLQASLYCHADDAYLCRKCDKWVHKANFLAFRHIRCFLCNTCKNLTRRYLIGASLEVVLPATVSWN* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01271 89 CDD Bbox1_BBX-like 20 61 - -
Rops3g01271 89 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 19 69 - -
Rops3g01271 89 SMART bboxneu5 15 61 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01271 Rops-Chr3 18321033 18321678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01271 20 87 C2C2-CO-like Transcription Factor Family AT3G21890 57.971 4.79e-24 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops3g01271 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01271 - - gmx:100500322 147.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01271 3 18321033 18321678 Rops3g01271 3 18321033 18321678 ECH