Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01257 ATGACGGTTACAAAACTGACACACCCACTAGATCACTGCCACGTGTCAGCGGTTTCTTCAAGAAAGATGAAACAGCGAACACAAGTCTTCATCTCGTCATCCTGTCAGAAGAACAGGTTGGGCTGTGATGCATCAGTGCTTCTGAACTCAACAAAAACCAATCAAGCTGAAAAGGATGCTATTCCAAATCTTACACTCAGAGGCTATGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGCGTAGTCTCTTGTGCTGATATCTTAGCTTTGACTGCCAGAGATTCTGTTCATGTCATTGGTGGACCTTATTGGACTGTTCCAACAGGTAGAAGGGATGGGATCATCTCTATCGCAACAGAAGTCCTTCGTGGCCTCCCTGCTCCATTTCACAACCTCACCACCCTCCTTACTATCTTTGGCAATGTTGGACTTGATGCAAATGACTTGGTCTTGCTCTCTGGTGCTCACACGATTGGTATGTCCCATTGCTCATCACTTGCAAACAGACTGTATAATTTTACTGGCAAGGGTGATCAAGACCCAAGTCTAGACAGTCAATATGCAACAAATCTCAAGACCTTTAAGTGCAAGAACATCAATGATAAAACCACAATTATTGAGATGGACCCTGGAAGTCAAAATACATTTGATCTTGGTTATTACAATCAAGTAATTAAGAGAAGGGGCCTTTTCCAATCAGATGCTGCATTGCTAACTAGCTCAACCACAAGGTCTATTATCACCCAACAGCTTCAGTCAGCTCAAGGATTCTTTGCTGAATTTGCCAAGTCCATGGAGAAAATGGGCCGAATTAATGTCAAGACTGGGACTGAAGGAGAGATCAGGAAGCACTGTGCATTTGTAAATTAA 885 0.4305 MTVTKLTHPLDHCHVSAVSSRKMKQRTQVFISSSCQKNRLGCDASVLLNSTKTNQAEKDAIPNLTLRGYDFIDRIKSLVEAECPGVVSCADILALTARDSVHVIGGPYWTVPTGRRDGIISIATEVLRGLPAPFHNLTTLLTIFGNVGLDANDLVLLSGAHTIGMSHCSSLANRLYNFTGKGDQDPSLDSQYATNLKTFKCKNINDKTTIIEMDPGSQNTFDLGYYNQVIKRRGLFQSDAALLTSSTTRSIITQQLQSAQGFFAEFAKSMEKMGRINVKTGTEGEIRKHCAFVN* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01257 294 SUPERFAMILY Heme-dependent peroxidases 41 294 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PANTHER PEROXIDASE 25-RELATED 41 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 CDD secretory_peroxidase 41 293 IPR033905 GO:0004601|GO:0042744
Rops3g01257 294 PRINTS Plant peroxidase signature 86 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PRINTS Plant peroxidase signature 105 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PRINTS Plant peroxidase signature 228 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PRINTS Plant peroxidase signature 212 227 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PRINTS Plant peroxidase signature 268 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PRINTS Plant peroxidase signature 152 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PRINTS Plant peroxidase signature 67 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PRINTS Haem peroxidase superfamily signature 87 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PRINTS Haem peroxidase superfamily signature 105 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 PRINTS Haem peroxidase superfamily signature 214 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 Gene3D Peroxidase, domain 2 131 273 - -
Rops3g01257 294 Pfam Peroxidase 40 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 FunFam Peroxidase 40 139 - -
Rops3g01257 294 ProSitePatterns Peroxidases proximal heme-ligand signature. 153 163 IPR019793 -
Rops3g01257 294 ProSiteProfiles Plant heme peroxidase family profile. 41 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01257 294 FunFam Peroxidase 131 273 - -
Rops3g01257 294 Gene3D - 41 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01257 Rops-Chr3 18106363 18117238 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01257 41 294 Peroxidase AT1G05260 65.490 2.18e-121 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01257 K00430 - gmx:100785662 421.779