Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01255 ATGGGAAGCCAGAGTTGCTTAAAGGTTTTGATCATTGGTCTTATAGCATTAATTGGATCAACTCATGCTGATTTGCAGCCTGGTTTCTATACTAAAAGTTGCCCAAAGGCTGAGAAAATCGTTTTGAAATATGTTCTTGAGCATATCCCCAACGCCCCATCACTGGCAGCTGCCCTCATAAGATTGCATTTCCATGACTGTTTTATCCGGGGCTGTGATGCATCAGTGCTTCTAAACTCAACAAAAACCAATCAAGCTGAAAAGGACGCTCTTCCAAATCTTACACTCCGAGGCTATGAATTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGGGTAGTCTCTTGTGCTGATATCTTAGCTTTGACTGCCAGAGATTCTGTTCATGCCATTGGTGGACCTTATTGGAATGTTCCAACAGGTAGAAGGGATGGGATCATCTCTATCGCAACAGAAGCTCTTCGTGGCCTTCCTGCTCCATTTCACAACCTCACCATCCTCCTAACAATCTTTGGCAATGTTGGACTTGATGTAAATGACTTGGTCTTGCTCTCTGGTGCTCATACAATTGGTATGTCCCATTGCTCATCAATTGCAACCAGACTGTATAATTTTACTGGCAAGGGTGATCAAGACCCAAGTCTAGACAGTGAATATGCAACAAATCTAAAGACCTTTAAGTGCAAGAATAGCAATGATCAAACCACAATTATTGAGATGGACCCTGGAAGTCGCAATACATTTGATCTAGGTTATTACGATCAAGTTGTCAAGAGAAGGGGCCTTTTCCAATCAGATGCTGCATTGCTAACTAGCTCTACTACAAGGTCTATTATCACCCAACAGCTTCATTCAGCTCAAGGATTCTTTGCTGAATTTGCCAAGTCCATGGAGAAAATGGGCCGAATTAATGTAAAGATTGGGACTGAAGGAGAGATCAGGAAGCATTGTGCATTTGTAAATTAA 975 0.4205 MGSQSCLKVLIIGLIALIGSTHADLQPGFYTKSCPKAEKIVLKYVLEHIPNAPSLAAALIRLHFHDCFIRGCDASVLLNSTKTNQAEKDALPNLTLRGYEFIDRIKSLVEAECPGVVSCADILALTARDSVHAIGGPYWNVPTGRRDGIISIATEALRGLPAPFHNLTILLTIFGNVGLDVNDLVLLSGAHTIGMSHCSSIATRLYNFTGKGDQDPSLDSEYATNLKTFKCKNSNDQTTIIEMDPGSRNTFDLGYYDQVVKRRGLFQSDAALLTSSTTRSIITQQLHSAQGFFAEFAKSMEKMGRINVKIGTEGEIRKHCAFVN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01255 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Rops3g01255 324 PANTHER PEROXIDASE 25-RELATED 18 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 Gene3D Peroxidase, domain 2 161 303 - -
Rops3g01255 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Rops3g01255 324 FunFam Peroxidase 161 303 - -
Rops3g01255 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 CDD secretory_peroxidase 25 323 IPR033905 GO:0004601|GO:0042744
Rops3g01255 324 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 Gene3D - 28 324 - -
Rops3g01255 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 FunFam Peroxidase 28 168 - -
Rops3g01255 324 Pfam Peroxidase 49 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01255 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01255 Rops-Chr3 18083634 18085340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01255 14 324 Peroxidase AT1G05260 65.064 1.04e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01255 K00430 - gmx:100785662 524.242