Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01232 ATGGCAGATATCAAAGCGATAATGGTTAAACAAGGGTTCGCATGCTTCACCACCGGAGTGGACAATCCCAACCCCGTATGGAACAGTGAAAATGTCCTGCTAGAAAACCTTCCTGATCTTGTCAACCAACTTTTCTTGGTTGTCATTACCACTCGTTTCTTTTACTTAATCTTCAGACCCTTCCATCAACCTCATTTTGTTGCTGAGATTCTTGCGGCTCTCTTCCTAAATATAAAAGTAAATGGACAATTGCTTCTTCCGGAAATGGTAGGTCCAAAGCAAGTCCATGCTGTGGAAACCTTGGCACATGTGGGTCTCATCTACCATGTCTTCATCAATGGTTTGGAGATGAACTTGGAAACTGTCCTACGAGCGGGAAAGAAGGCAACAACCATTGCTGTTGCTGGCACCTTGATTCCAATGGCATTGGGAGCTGGAATATATTTCTTGTTTCAAAATTTTAGTGTGATGCATGATCAACTTTCACATTTCAATGGACCTGAAGCTTATATAATGTGGACCTTAGTTGTTAGTGTCACAAGTTTCCCCATCTTGGCTCACATCCTTGCGGACCTAAAGATCCTCTACACTGGGCTTGGTAGAGTGGCATTAACATCAGCTACTGTTAATGACTTCTATAATAGGGCTATGTTTGTGCTCTTGGTTCCATTGGCTGTTAATGGTACAAAAGGCTTTTACTCACTGATGGGCACCATAGTTTTTATCCTTTTCTGCTTCTTTGTGCTACGTCCTTCCCTCATGAGGCTATTACTCCTAAATACCAATCAGAATGAAAAGGACAATTACCTGTTATCATATCTGATCATGGGTGTCTTTGTTTGTGCCACTGTTACTGAATTTCTTGGTACAAACTCTGTTGTTGGGGCTTTGGTGTATGGATTGATCCTCCCTCGTGGAAGATTCACTGACATGTTGATAGAGAAATCAGATGATATTGCATCTCGCTGTATGAAGATTGTGAGCACTATAATAGCCACTCGCTTCTATGGAATGCCTCTCCATGATAGCATGGCTCTTGGAGTGCTTATGAACACCAAAGGCGCCTTACCATTCATAATACTAAACATTGCATGGAATAAAAAGATTTTGAGTCATGAGGCCTTTACAATTTTGGTGTACAGTATTCTTGTTATGACTGCAATAGTGTCTCCTATCATCAACGGCATTTACAGGCCAAGAAAGCGACATGAGCAAAATAAGCTAAGGACTATAGAGAACTTAAAGGCAGATTCAGAGATCAGAGTTATGGTTTGTGTACACAATGCTCGCCATGCCAATGGAATGATCAACATCCTTGGAGCTTGCAATGGCACTAACGTTTCCCCTTTACGTGTTTTTGCTCTTCAACTTGCTGAGCTCAAAGGACGTGCCACTGCCCTTCTAGTTTCCCACATAGAGCAATCCACTCCCCAAAAGTGTGGAACACATGAACTTACCAACCCATCAGGATCAAACTCGGAAAGCATCACCGACATTTTTGTAGATTATGCATCTAACCATGAACACACAATTGTGGAGAGCCTTATTGCTATGTCATCCTACACAACCATTCATAAGGACATATACAATTTAGCCTCAGAGAAACAAGCATCATTGGTTCTCCTCCCTTTTCACAAACAATCAAGTGCAGAAGGTACTCTAGAGATAACTGATGCCAGATTCAAAGACATAAACCAAAATCTAATGCAAGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTGGTCATGGGGACAAGACCTACTTGCGTACTCTTATGCTCTTCATTGGTGGGCCTGATGACCGTGAAGCCTTAGCTATTGCTTGGAGAATGTCAAAGCATCCAGGGACACAACTCACTGTGGTGAGGATTATTTTGTGTGGAAAAGCTACAGAAGGAGTAGATACATCAACAAAAAGTGAAGTTCAAGGGCTATTATCTGCGATAATAGACAGTGGAAAAGAAAAGGAGTTGGATGAAGGGTTTGTAGGTTCATTTAGACTTAAGGCAGTGAACAATGAGGATTCCATAACTTATGAAGAGATGGAAGTGCACAATGGTGACGATATTACTGAAGTACTTAATCAATTGGACAAAGGAGGCTATGATTTATACATTTTAGGGCAAGGAAAAGGAAGGAACTCTTTGTTATTAGAAAACTTATTGGAATGGACTGATTGCCCTGAACTTGGAGTTATTGGGGACATGTTGGCATCAAATAGTTTTGGTTCAAGCTCTTCAATACTTGTTGTCCAACAATATGGATTTGGGGGAATGGACTTTAAGACTAGTTGTAATAAGCATTCAAATGACGATGATCTTGAGTCACTTTTTCAAAGGAAAAAATGA 2352 0.4094 MADIKAIMVKQGFACFTTGVDNPNPVWNSENVLLENLPDLVNQLFLVVITTRFFYLIFRPFHQPHFVAEILAALFLNIKVNGQLLLPEMVGPKQVHAVETLAHVGLIYHVFINGLEMNLETVLRAGKKATTIAVAGTLIPMALGAGIYFLFQNFSVMHDQLSHFNGPEAYIMWTLVVSVTSFPILAHILADLKILYTGLGRVALTSATVNDFYNRAMFVLLVPLAVNGTKGFYSLMGTIVFILFCFFVLRPSLMRLLLLNTNQNEKDNYLLSYLIMGVFVCATVTEFLGTNSVVGALVYGLILPRGRFTDMLIEKSDDIASRCMKIVSTIIATRFYGMPLHDSMALGVLMNTKGALPFIILNIAWNKKILSHEAFTILVYSILVMTAIVSPIINGIYRPRKRHEQNKLRTIENLKADSEIRVMVCVHNARHANGMINILGACNGTNVSPLRVFALQLAELKGRATALLVSHIEQSTPQKCGTHELTNPSGSNSESITDIFVDYASNHEHTIVESLIAMSSYTTIHKDIYNLASEKQASLVLLPFHKQSSAEGTLEITDARFKDINQNLMQDAPCSVGIFVDRGHGDKTYLRTLMLFIGGPDDREALAIAWRMSKHPGTQLTVVRIILCGKATEGVDTSTKSEVQGLLSAIIDSGKEKELDEGFVGSFRLKAVNNEDSITYEEMEVHNGDDITEVLNQLDKGGYDLYILGQGKGRNSLLLENLLEWTDCPELGVIGDMLASNSFGSSSSILVVQQYGFGGMDFKTSCNKHSNDDDLESLFQRKK* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01232 783 Gene3D - 39 321 IPR038770 -
Rops3g01232 783 Gene3D - 322 407 IPR038770 -
Rops3g01232 783 Pfam Sodium/hydrogen exchanger family 323 392 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops3g01232 783 Pfam Sodium/hydrogen exchanger family 45 320 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops3g01232 783 Coils Coil 783 783 - -
Rops3g01232 783 PANTHER CATION/H + ANTIPORTER 323 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01232 Rops-Chr3 17495728 17499052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01232 15 755 Antiporter Super Family AT2G13620 36.398 3.88e-163 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01232 - - mtr:11442852 926.006