Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01230 ATGGGTGTTCTTCTTCCCCTTCATTTTATCCAATATATGCTCTCACTCTATCTCTCTATTGCTCCAATTGTGACGACGACGATTCCACCATCGACGAGCCTTCAAGAGAAGGAACTTCTCTTGGCGAGAAGACGGTGGAGGAAGGATGAGACCTACCAAGTTTCTTTGTCCCACTGGTTTAGCAGGTCCTGTATAATGACGCTAGCAGCCAGCCAGGGGATCAGAGTTCTGACATCTGCAGCTATGGATGATATGCCAATTAGACTTACTTTTTTTTTATGTTTGGATAATGGACTACAAGTCCAGCTTGTGAAGTGCATAATGAAAAATATAGCAGTTGACATCTCTTTCAATCAGATGGATGGACTCTATGCTCTGCACTTTCTGGAGCGGGCTCTATGCACTTGGAACTGGGTCGTCGTCCCAATTTATGGACTTTTGAATAATGGATATCCTAAGGGTTGCGATGCTTCATTGCCGTTGAATGAAAATGGTGATAGAAACCGTTCAGTTGAGAAGCAGCAAGCTGGTGGGCCTTTCTTTCCAGTTTTAACAAGCAGAAGGGATAGTCATCAATCATTTTTCGAGGAAGCAATTGATCACATTCCCAGACCTGATGATAACATTACACGCACACTGCATCTCTTCAGTCTTAGAGGATTTAATGAAAGAGAAACAGTCAGCCTTCTTGATTAA 696 0.4296 MGVLLPLHFIQYMLSLYLSIAPIVTTTIPPSTSLQEKELLLARRRWRKDETYQVSLSHWFSRSCIMTLAASQGIRVLTSAAMDDMPIRLTFFLCLDNGLQVQLVKCIMKNIAVDISFNQMDGLYALHFLERALCTWNWVVVPIYGLLNNGYPKGCDASLPLNENGDRNRSVEKQQAGGPFFPVLTSRRDSHQSFFEEAIDHIPRPDDNITRTLHLFSLRGFNERETVSLLD* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01230 231 Gene3D - 175 202 - -
Rops3g01230 231 Pfam Peroxidase 174 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01230 231 ProSiteProfiles Plant heme peroxidase family profile. 87 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops3g01230 231 SUPERFAMILY Heme-dependent peroxidases 145 230 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops3g01230 231 Gene3D Peroxidase, domain 2 203 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01230 Rops-Chr3 17485811 17489820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01230 176 230 Peroxidase AT4G33870 50.909 1.19e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01230 K00430 - gmx:100804973 113.62