Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g01225 | ATGGGTGTGATTAAGGCTGCCATTGGAGATGCAATTTTGACATCAATATTTGTTTTCAGTATCTCATCTTTAAGGATTCTCTCTTATGAGACAGCTGTTTTTCTTGGTCTTCAAGCAGTTTCACTTGCAGGTCTCTTCATTACTACCATCATAAACACAATCATTATCCTTATGATAAGCTTGATTGGCAGGCTCTTGGGTGGTGCTAGCTTCAACCCCTCATCCACTGTTTCCTTCTACACTGCAGGGCTAAGGCCTGATGCATCTCTTGCATCCATGGCTGTAAGATTTCCTGCTCAAGCAGCAGGTGGAGCTGTTGGTGTCAAGGCTATTCTGCAAGTGATGCCAACTCAGTACAAACACATGCTGAAAGGGCCATCCTTGAAAGTGGACTTGCATACAGGAGCTATAGCTGAAGGGGTGTTAACTTTTTTTCATAACTTAGCTATCCTTTTTGTCATGCTCAAGGGTCCTAAAAACCCATGGTTGAAGGTGTATTTGCTTTCTGTGGCAACTGTGGCTTTGGTTATTCCAGGTTCTGGTTACACGGGGCCTTCTATGAACCCTGCTAATGCCTTTGGATGGGCCTATTTGAACAACAAGCACAATACTTGGGAGCTGTTTTATGTCTATTGGATTTGTCCTTTAATGGGGGCAACCTTAGCTGCTTTGGTCTACAAGTTTCAATTTATGTCACCAACCAAGCAGAAGAAAGCTTGA | 720 | 0.4319 | MGVIKAAIGDAILTSIFVFSISSLRILSYETAVFLGLQAVSLAGLFITTIINTIIILMISLIGRLLGGASFNPSSTVSFYTAGLRPDASLASMAVRFPAQAAGGAVGVKAILQVMPTQYKHMLKGPSLKVDLHTGAIAEGVLTFFHNLAILFVMLKGPKNPWLKVYLLSVATVALVIPGSGYTGPSMNPANAFGWAYLNNKHNTWELFYVYWICPLMGATLAALVYKFQFMSPTKQKKA* | 240 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g01225 | 239 | Coils | Coil | 239 | 239 | - | - | |
Rops3g01225 | 239 | Gene3D | Glycerol uptake facilitator protein. | 2 | 238 | IPR023271 | - | |
Rops3g01225 | 239 | PRINTS | Major intrinsic protein family signature | 52 | 76 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g01225 | 239 | PRINTS | Major intrinsic protein family signature | 92 | 111 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g01225 | 239 | PRINTS | Major intrinsic protein family signature | 209 | 229 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g01225 | 239 | PRINTS | Major intrinsic protein family signature | 169 | 191 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g01225 | 239 | PRINTS | Major intrinsic protein family signature | 5 | 24 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Rops3g01225 | 239 | PANTHER | AQUAPORIN SIP1-1 | 1 | 238 | IPR044222 | GO:0015250 | |
Rops3g01225 | 239 | SUPERFAMILY | Aquaporin-like | 3 | 233 | IPR023271 | - | |
Rops3g01225 | 239 | Pfam | Major intrinsic protein | 4 | 226 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g01225 | Rops-Chr3 | 17405472 | 17406565 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g01225 | 1 | 227 | Major Intrinsic Protein MIP | AT3G04090 | 45.690 | 1.12e-59 | 186 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g01225 | K09875 | - | gmx:100797126 | 338.576 |