Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01203 ATGTATTTTGGAGGTAGTGATCTAAGCAACAACAACATTGGAGGAAGCATTCCATCCAATTTGCCAGTTACCATGAGAAACTTTTTTCTTTCAGCTAAGCAGTTCACTGGAAGTATTCCGACCTCTTTATCCACTTTAACTGGATTGACAGACATGTCTCTTAACAACAATCATTTATCTGGAGAAATACCAGATGCATTTCAGTCACTTACGCAATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGAGAATTGCCTTCTTCGGTGGAAAATTTGTCATCTGTCACTAACATGAATATTGAGAACAAGCAGTTTGCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCTAACTTCAGAAATTGGCTTGAGGAAGTCTTAAAAACACCTCCAGCAGACCATTTACAAGTTCTTCCTTCACCATATCTGTCTCTTCCACTTATGAGAATTGTGAGAATTGCTAGATCTTCAATTGTTTGTCTTTCCCAAAGTCAACAAAGCAACCATGAATATGCTTCACAGGATATTTATAATAGATGCTGGAGTGCCTATGAAGACATTCCGTTACTATCACTCGAGTCTAGGAGATTAGATTTTTCAGGACTGATGGAAGACATTAAGAGTGCTCCAAATGGTTCATTCTTTCTGCTTCATAATTGTGCTCACAATCCTACTAGAGTAGATCCTTCAGATAAAGGACCTGGAGAGGAAATATGCATTGAGAAAGGATTTGAAATTCTGCGTAAGGTCTGCATCTCTGTCATGGGTTCGGTTTCTCTATACATCGGGAATCAATTGTCTTCCAAAATTTTAAATTTGATTTCAAAAGAAGAAATGGAGCAAGAGGGTAAGGCACAGATAGAAGTTATTTTGAGTTGGGAAAGATTGCTCCAAGCAAAGATTGAAGAGGTAAAAAGGGATAAGATCTACAATGATCGAACGAAAGAACTTGAGCATCGAGTAGAAAAACTTGAGAATCCTTGGTGGTGGAGGATTCTCACATGGATTTTAACAAGTAGCCAAGACAGTGGACATGGAAAGAGGTTAAGATCAAAGCCTGCAGAGGCTATTGTAAAGCCTGCAAAGGCTAGAGTCAAGAATATTGTAAGAGAGGAAAAGATCCAGGAAGAGGTGATGACAAGTCAAATCTACCTCAGTGAAGGTTCATCTGCAAACAGACCACCTCTGTTTGAAGGAAAGGATTTTGGATACTGGAAAACCAGAATGGAGCTGTTTTTAAAATCCCAAGATGTATTCATGTGGGATATCATTGAGAATGATGACTATCATCCCACAAGAGCAGCTGAAGATGGTGGTGTTGAAACAAAGCCACCTACTGAGATGACTACAGAAGAAAGACATAGGTATCTTCTAAACTCAAAAGCCAAATTATTTCTTACCTGTGCTCTAAGTAAAACTCAGTGTGATTGA 1437 0.3855 MYFGGSDLSNNNIGGSIPSNLPVTMRNFFLSAKQFTGSIPTSLSTLTGLTDMSLNNNHLSGEIPDAFQSLTQLINLDLSNNNLSGELPSSVENLSSVTNMNIENKQFAGPIPPKLLSIPNFRNWLEEVLKTPPADHLQVLPSPYLSLPLMRIVRIARSSIVCLSQSQQSNHEYASQDIYNRCWSAYEDIPLLSLESRRLDFSGLMEDIKSAPNGSFFLLHNCAHNPTRVDPSDKGPGEEICIEKGFEILRKVCISVMGSVSLYIGNQLSSKILNLISKEEMEQEGKAQIEVILSWERLLQAKIEEVKRDKIYNDRTKELEHRVEKLENPWWWRILTWILTSSQDSGHGKRLRSKPAEAIVKPAKARVKNIVREEKIQEEVMTSQIYLSEGSSANRPPLFEGKDFGYWKTRMELFLKSQDVFMWDIIENDDYHPTRAAEDGGVETKPPTEMTTEERHRYLLNSKAKLFLTCALSKTQCD* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01203 478 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 31 123 - -
Rops3g01203 478 SUPERFAMILY PLP-dependent transferases 189 232 IPR015424 -
Rops3g01203 478 Pfam Leucine rich repeat 48 104 IPR001611 GO:0005515
Rops3g01203 478 Gene3D Ribonuclease Inhibitor 5 126 IPR032675 -
Rops3g01203 478 SUPERFAMILY L domain-like 7 126 - -
Rops3g01203 478 Pfam Aminotransferase class I and II 190 231 IPR004839 GO:0009058|GO:0030170
Rops3g01203 478 Gene3D - 154 233 IPR015421 GO:0003824
Rops3g01203 478 FunFam Leucine-rich repeat receptor protein kinase EMS1 23 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01203 Rops-Chr3 17012060 17029215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01203 5 121 Strubbelig Receptor Gene Family AT4G03390 58.273 7.21e-40 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01203 - - lja:Lj3g3v2861380.1 180.644