Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01192 ATGGGTGTCTCAGGGAAGTGGATTAGAGCATTGGTTGGTCTAAAAAAATCAGATAAACCTGAGTCTTCAGAGAAGGATGGAAATAAGGTTAGCAAGTTTCGGCATCGGAGAAAGCATTCCATTGAAATTGAAAATAGCAAACTTCAAAATGAGTTTGATGATAATGGTGCTCCACCTATTGGAGATGCTGATCATACAAATCCCCATTCAAACCCTGATGTCCATCATTCACCTTCTACTTCACAACAAGCACAGGATACTGCACATAGTTATCAATTCATAAGGGAAGAATGGGCTGCAACACGCATTCAAACAGCATTTCGAGGATTTTTGGCCAGAAGAGCACTTCGAGCTTTGAAAGGATTAGTAAGGCTTCAGGCTCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACTCTCCGTTGTATGCAAGCCTTGGTGAGGGTTCAGGCTCGTGTTCGGGCTAGGCGTGTTCGCTTGGCATTGGAAAATCAAACAGAACAACAGAAACTCCAGCAACAGCTTGCAAACGAAGCTCGTGTCCGAGAAACTGAAGAAGGTTGGTGCGACAGTGTGGGATCTGTTGAAGAAATTCAAGCCAAAATATTAAAGAGGCAGGAGGCTGCAGCCAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGGCAGCAGGCTGTTTCCTCTGGTGGGTTTGAACCTGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTTCGTCCTTGGGAGAATCGCTTTTTTGACATTAATACGAGGGATGGAGTAAAGATAGATGGAAATGGATCTGTGGATGGTATAAATGGAATCAGACCTCAGTTAAAATCTGCTAACACAAATTCAATTCCACCAAATATTCATCCAAACCTTGCCAGTCAGAAAACTGCTCCCTCTCTTTCTGATGGCTGTGATTCTTCTTCACCTAGTAAGTCAGCAGGTTTGCTAGAGACATCAAACACACAGTCTGTTAAACCAAAGTCTAATGCAAATGTTCAAAATCCAACTGAAGAAGCCAACTCAAGATCTGAAACTCGAAGATCTCACAGTAATCCAAAGGAGAGATCGGCACGAGTAGATAAACAGGCAAAAAAGCGATTATCTCTACCCAACAATGCAGGGGGAGGTCCCGGGGCTCAAACAGCCAGAAATCCTACTAGAACTAATGTGAGAGGGACACGTGGCGTGCAAAAGCCTATAAAGGATAAACCTAAGCTCAATGGAGGAGGGGATGTGAATCTTACTAAATCTGTTCCACAGCCTACAGTTATGTAG 1326 0.4382 MGVSGKWIRALVGLKKSDKPESSEKDGNKVSKFRHRRKHSIEIENSKLQNEFDDNGAPPIGDADHTNPHSNPDVHHSPSTSQQAQDTAHSYQFIREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALENQTEQQKLQQQLANEARVRETEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRQQAVSSGGFEPDKSSWGWNWLERWMAVRPWENRFFDINTRDGVKIDGNGSVDGINGIRPQLKSANTNSIPPNIHPNLASQKTAPSLSDGCDSSSPSKSAGLLETSNTQSVKPKSNANVQNPTEEANSRSETRRSHSNPKERSARVDKQAKKRLSLPNNAGGGPGAQTARNPTRTNVRGTRGVQKPIKDKPKLNGGGDVNLTKSVPQPTVM* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01192 441 MobiDBLite consensus disorder prediction 357 382 - -
Rops3g01192 441 FunFam IQ-domain 11 95 146 - -
Rops3g01192 441 MobiDBLite consensus disorder prediction 391 410 - -
Rops3g01192 441 MobiDBLite consensus disorder prediction 12 30 - -
Rops3g01192 441 SMART iq_5 118 139 IPR000048 GO:0005515
Rops3g01192 441 SMART iq_5 95 117 IPR000048 GO:0005515
Rops3g01192 441 MobiDBLite consensus disorder prediction 290 356 - -
Rops3g01192 441 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Rops3g01192 441 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Rops3g01192 441 Gene3D - 95 138 - -
Rops3g01192 441 PANTHER IQ-DOMAIN 5-RELATED 1 392 - -
Rops3g01192 441 MobiDBLite consensus disorder prediction 12 88 - -
Rops3g01192 441 MobiDBLite consensus disorder prediction 72 88 - -
Rops3g01192 441 MobiDBLite consensus disorder prediction 287 441 - -
Rops3g01192 441 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Rops3g01192 441 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01192 Rops-Chr3 16849592 16857639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01192 1 424 IQD Protein Family AT3G22190 57.077 1.49e-114 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01192 - - tpra:123923158 632.484