Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01188 ATGGATGTTGATTCCTCGATGGTGCCGGATTCCGATCACGATTCACCGGTGCAGAACCACGCCGAGAGAGAGCAGCTAGGGGAGCCTCCATCTTCGACGTCGTCGTCGGGGACCGGATCTCCGGCGGCGGCGCCGGTGCAGCAACAACAACAGCAGCAACCGGCGGCTGCTGCTTCGGTGCAGCAGCACACTCCGGTGGTTGGTCCGAGGCTTGCGCCGACTTACTCAGTGGTGAATGCGATTTTGGAGAAGAAGGAGGATGGACCAGGGCCGCGGTGCGGTCACACGTTAACGGCGGTGGCGGCGGTCGGAGAGGAAGGCACGCCGGGGTACATTGGTCCGAGGTTGATTTTGTTCGGCGGTGCAACTGCGCTTGAAGGAAATTCTGCAGCTTCAGGAACTCCTTCATCTGCTGGAAATGCAGGAATACGTTTAGCTGGTGCAACGGCTGATGTCCACTGTTACGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTTGGAGAGCCACCAACCCCAAGGGCTGCACATGTGGCAACTGCTGTGGGGACAATGGTAGTTATTCAGGGTGGCATCGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACACAACAACGGCCACGATGGCATAGAGTTGGTGTTCCAGGCCCTGGACCTGGGCCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATTGGAGGCAATGATGGAAAAAGACCGTTGGCTGATGTGTGGGCCCTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCAAGTGCTCGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGGCAAGTGCATATGGACTCGCTAAGCATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCTGGTGTCTCACCATCTCCTAGATATCAGCATGCAGCGGTGTTTGTTAATGCAAGGCTCCATGTCTCTGGCGGGGCTCTTGGTGGAGGACGGATGGTTGAAGACTCTTCAAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACAGGTAGATACAGTGCAGATGCAGCTGGTGGAGATGCCTCCGTTGAGTTGACACGGCGTTGTAGGCATGCAGCTGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGTGGCGGAGTTTTGCTGGATGACCTTCTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAACTGCTGCTTCACATGCTGCTGCAGCAGCAGCTGCATCTAATGTACAAATGGGACGAGTACCTGGACGATATGGATTTATTGATGATAGGACAAGGGAAACAATGCCTGAAACAGCTGCTGATGGTGCAGTAATTTTGGGAAATCCAGTTGCTCCCCCTGTAAATGGTGACATGTATACTGATATCAGCACTGAAAATGCCATGCTTCCGGGATCTAGGAGAACTAGCAAAGGAGTTGAGTATCTGGTTGAAGCATCTGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCCAAGGCACGACAAGTGAATGGAGAAGTTGAATTGCCTGACCGAGACCGTGGGGCTGAGGCTACACCTAGTGGGAAACAATCTTCCTTGATTAAGCCTGATTCTGCAGGGTCAAATAGCATTGCTCCTGGTGGAGTTAGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCGATTGATCAGTTTGAAAATGAAGGCAGGCGGGTCAGTTATGGGACTCCAGAAAGTGCAACTGCTGCTAGAAAATTATTAGATCGGCAGATGTCTATCAATAGTGTCCCAAAGAAGGTCATAGCACACCTCTTAAAGCCTCGTGGCTGGAAACCACCTGTTCGCCGGCAGTTTTTCTTGGATTGCAATGAAATTGCGGATCTTTGTGATAGTGCAGAGAGGATATTTTCAAGTGAACCAACGGTCTTACAGCTTAGGGCACCGATTAAAATATTTGGTGATTTGCATGGGCAGTTTGGGGATCTCATGCGCCTCTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATAAGCCTTCTACTTGCCCTGAAGGTTGAGTATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTTCGAATTGAGTGCATCGAGAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCACCGCATAAACCGTCTATTTAATTGGCTTCCTCTGGCTGCTCTAATTGAGAAAAAAATAATTTGCATGCATGGGGGTATTGGTCGGTCAATAAATCACGTGGAACAAATTGAGAATATTCAGCGTCCAATTACGATGGAAGCAGGATCCATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGCGTGGAAGGGCTTCGGCCAAATGCCAGAGGTCCTGGGTTAGTTACTTTTGGGCCTGATCGTGTCATGGAATTTTGCAACAACAATGATCTTCAGTTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTGATCACCCTTTTCTCAGCTACAAATTACTGTGGTACTGCAAATAATGCTGGAGCGATATTAGTTTTGGGTAGAGATCTTGTGGTGGTTCCTAAACTGATCCATCCATTACCACCTGCAATTTCTTCACCTGAAACGTCACCAGAACGTCATATTGAAGATACTTGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGCCGGCCTCAAGTAACAAATGACAGAGGCCTTTAG 3006 0.4923 MDVDSSMVPDSDHDSPVQNHAEREQLGEPPSSTSSSGTGSPAAAPVQQQQQQQPAAAASVQQHTPVVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQMGRVPGRYGFIDDRTRETMPETAADGAVILGNPVAPPVNGDMYTDISTENAMLPGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQSSLIKPDSAGSNSIAPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRGL* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01188 1001 Gene3D - 200 460 IPR015915 GO:0005515
Rops3g01188 1001 Pfam Calcineurin-like phosphoesterase 702 909 IPR004843 GO:0016787
Rops3g01188 1001 Pfam Kelch motif 333 379 IPR011498 GO:0005515
Rops3g01188 1001 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1000 - -
Rops3g01188 1001 MobiDBLite consensus disorder prediction 979 1001 - -
Rops3g01188 1001 MobiDBLite consensus disorder prediction 550 587 - -
Rops3g01188 1001 Pfam Galactose oxidase, central domain 227 280 - -
Rops3g01188 1001 PRINTS Serine/threonine phosphatase family signature 770 794 IPR006186 GO:0016787
Rops3g01188 1001 PRINTS Serine/threonine phosphatase family signature 920 936 IPR006186 GO:0016787
Rops3g01188 1001 PRINTS Serine/threonine phosphatase family signature 702 729 IPR006186 GO:0016787
Rops3g01188 1001 PRINTS Serine/threonine phosphatase family signature 838 865 IPR006186 GO:0016787
Rops3g01188 1001 PRINTS Serine/threonine phosphatase family signature 737 764 IPR006186 GO:0016787
Rops3g01188 1001 PRINTS Serine/threonine phosphatase family signature 808 834 IPR006186 GO:0016787
Rops3g01188 1001 PRINTS Serine/threonine phosphatase family signature 898 918 IPR006186 GO:0016787
Rops3g01188 1001 Gene3D - 638 977 IPR029052 -
Rops3g01188 1001 FunFam Serine/threonine-protein phosphatase 71 268 - -
Rops3g01188 1001 SMART pp2a_7 674 958 IPR006186 GO:0016787
Rops3g01188 1001 MobiDBLite consensus disorder prediction 566 580 - -
Rops3g01188 1001 MobiDBLite consensus disorder prediction 1 63 - -
Rops3g01188 1001 ProSitePatterns Serine/threonine specific protein phosphatases signature. 771 776 IPR006186 GO:0016787
Rops3g01188 1001 MobiDBLite consensus disorder prediction 980 1001 - -
Rops3g01188 1001 SUPERFAMILY Metallo-dependent phosphatases 659 965 IPR029052 -
Rops3g01188 1001 MobiDBLite consensus disorder prediction 25 60 - -
Rops3g01188 1001 FunFam Serine/threonine-protein phosphatase 272 472 - -
Rops3g01188 1001 CDD MPP_Bsu1_C 654 956 IPR041758 -
Rops3g01188 1001 Gene3D - 74 199 IPR015915 GO:0005515
Rops3g01188 1001 SUPERFAMILY Kelch motif 146 436 IPR015915 GO:0005515
Rops3g01188 1001 FunFam Serine/threonine-protein phosphatase 638 978 - -
Rops3g01188 1001 PIRSF STPPP_BSU1 40 1001 IPR012391 GO:0004721|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01188 Rops-Chr3 16802341 16815578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01188 666 901 Calmodulin-binding Proteins AT5G63870 29.044 9.22e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01188 - - gmx:100816091 1801.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01188 3 16802341 16815578 Rops3g01188 3 16802341 16815578 ECH
Rops7g00477 7 5980718 5984164 Rops3g01188 3 16802341 16815578 PCT