Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01121 ATGGCTTCCCTTCATCCATCAGCTGCTAGTGATTATGAACCTAAACCTATCTCAAAATCAGTACTCCAGCAAACTGTCCTAGAAATTGAGGCCACCACACTGGATAAGAAAGATTTTAGAGGTCCAAGAAAGAATGGAGGAAAAGGTGTAGTTGAGACTAAGACAGGAGAGGTGGGGATATGCTTGACATGGAAGGATGTATGGGTGAATGTTTCCAATGGAAAGAATGGAAGCAGATCAATTCTTCAAGGTCTTACTGGTTATGCCAAACGAGGCCAGCTCTTGGCCATTATGGGTCCTTCTGGCTGTGGCAAGTCTACCCTACTAGATACTTTGGCAGGGAGATTAGGTTCAAACACAAGGCAAACAGGAGAAATTCTGATCAATGGTCACAAACAAGAACTGGCATATGGAACCTCGGCATATGTCACTCAAGATGATACCTTATTAACAACCTTAACAGTTAGAGAAGCAGTGCATTACTCAGCTCAACTCCAATTACCCAACACTATGTCCAAGGAAGAGAAGAAAGAAAGAGCAGACTTTACAATAAGAGAAATGGGTCTACAAGATGCCATTAACACAAGAATCGGAGGATGGGGTTGTAAAGGCATTAGTGGTGGTCAGAAAAGGCGAGTGAGCATTTGCATTGAGATCCTAACACGTCCCAGGCTTCTTTTTCTTGATGAACCAACTAGTGGATTGGACAGTGCAGCTTCCTATTATGTCATGAGAAGAATCGCTAATCTGAATCAAAAAGACGGCATTGAGAGGACTATTATTGCCTCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTCAATAACCTTTGTCTTCTATCTTCTGGTAGAACAATTTACTTTGGACTTGCTTCTACTGCATGTGAGTTTTTTGCTTCAAATGGTTTTCCTTGTCCTACTCTCCAAAATCCATCTGATCATATACTTAAAATTATAAACAAGGATTTTGATCAGGATATTGATGTGGGGTTAGCAGAGACTGGAACAATACCCACAGAAGAAGCAATCCGTATTCTTGTGAGCTCATATGAATCATCTGAAAGGAACCAAGAAGTTCAAAATGAAGTAGCAATGCTATCTGAAAAGCACATCGGTTCGATAGAGAAGAAGAGAGGGCATGCAACCTTCCTTAATCAATGCTTAGTTCTTATCAAAAGATCTTCCGTCAACATGTTTCGTGATCTAGGCTATTATTGGTTACGCCTTGGCATATATGTTGCATTGGCTATAAGTTTAGGCACTATATTCTATGATCTGGGTACAAGTAATCGCTCAATTCAGGATCGAGGATCCCTTCTTTCGTTTGTGATTGGATTCTTAACTTTTATGACGATTGGTGGATTCCCTTCCTTTGTGGAAGACATGAAGGTATTCGAACGAGAAAGACAGAATGGACATTATGGTGTTACTGCATATGTAATTGGGAACACCATTTCGTCTATCCCATTCTTGTTTATGGTTACACTGATTCCTGGAGTTATAGCTTACTACCTTCCTGGTCTTCAAAAAGGATGTGAGCACTTTTTGTACTTTGTTTGTGTTTTATTTGCAAGTCTGACGTTAGTAGAGAGTCTTATGATGGTAGTTGCAAGTTTGGTCCCCAATTATCTAATGGGAATCATAACTGGTGCTGGAATTCAAGGAATCATGCTGTTACTTGCGGGGTTCTTTAAATTGCCAAATGATCTTCCCAAGTTAGTTTGGAGATACCCTTTACACTATGTTGCATTCCATAGATATGCCTTACAAGGAATGTTCAAGAACGAGTATGAAGGACTTAGATTTTCTACTACTGATGAAAATAATGGAGGCTCACATAATTACATTAGTGGTGAAGATGTTGTAAGAAATACTTGGCAAACTGACATGAGTTATTCAAAATGGGTTGATCTTGCAATCTTGCTAGGGATGATTGTTCTGTATCGGGTTCTGTTCCTTGTTATCATTAAGACTACCGAAAAGGTGAAACCAATTGTTGGATCATTATCATGCATATCAGTGTCTCCCAACCGAACAATATAG 2046 0.3959 MASLHPSAASDYEPKPISKSVLQQTVLEIEATTLDKKDFRGPRKNGGKGVVETKTGEVGICLTWKDVWVNVSNGKNGSRSILQGLTGYAKRGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGHKQELAYGTSAYVTQDDTLLTTLTVREAVHYSAQLQLPNTMSKEEKKERADFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMRRIANLNQKDGIERTIIASIHQPSTEVFQLFNNLCLLSSGRTIYFGLASTACEFFASNGFPCPTLQNPSDHILKIINKDFDQDIDVGLAETGTIPTEEAIRILVSSYESSERNQEVQNEVAMLSEKHIGSIEKKRGHATFLNQCLVLIKRSSVNMFRDLGYYWLRLGIYVALAISLGTIFYDLGTSNRSIQDRGSLLSFVIGFLTFMTIGGFPSFVEDMKVFERERQNGHYGVTAYVIGNTISSIPFLFMVTLIPGVIAYYLPGLQKGCEHFLYFVCVLFASLTLVESLMMVVASLVPNYLMGIITGAGIQGIMLLLAGFFKLPNDLPKLVWRYPLHYVAFHRYALQGMFKNEYEGLRFSTTDENNGGSHNYISGEDVVRNTWQTDMSYSKWVDLAILLGMIVLYRVLFLVIIKTTEKVKPIVGSLSCISVSPNRTI* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01121 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 54 669 - -
Rops3g01121 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 308 IPR003439 GO:0005524
Rops3g01121 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 297 IPR027417 -
Rops3g01121 681 Pfam ABC-2 type transporter 387 598 IPR013525 GO:0016020|GO:0140359
Rops3g01121 681 Gene3D - 62 319 IPR027417 -
Rops3g01121 681 FunFam ABC transporter G family member 11 60 350 - -
Rops3g01121 681 Pfam ABC-2 type transporter 265 366 IPR043926 GO:0140359
Rops3g01121 681 Pfam ABC transporter 83 233 IPR003439 GO:0005524
Rops3g01121 681 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524|GO:0016887
Rops3g01121 681 SMART AAA_5 91 334 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01121 Rops-Chr3 15359042 15365544 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01121 92 269 Calmodulin-binding Proteins AT2G36910 29.189 2.30e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01121 K05681 - gmx:100794527 1031.17