Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01099 ATGGGAGATCATTCACACCCCAACTCAGAATCTGTAATCAGAGCAAACCATGAGATGTTGGCTTCAGTCACCGGAAGTCTTAGTGAAGCAAAGGCAGCAGCAATCCACCATTACAGTAAAAGCTTCCGAGGCTTTTCGGCCGTGATTACGCCAGAGCAAGCTTATAAACTTGCAGAATATAACTCAGTGGTGTCCGTTTTTGAGAGCAAAATGAATAAGCTCCACACTACACACTCTTGGGATTTTCTTGGAATAGACTCTGTCTACAAGAGCAACCATGCAGCTCTGGACTCCACATCCAATGTCATTGTTGGTGTCATTGACTCTGGGGTGTGGCCGGAATCGGAAAGCTTCAATGATTATGGATTAGGTCCTGTGCCTGAGAAATTCAAGGGAGAGTGTGTTACTGGTGATAATTTTACTCTAGCCAATTGCAACAAGAAAATTATTGGTGCCCGGTTCTATTCAAAAGGGTTCGAAGCAGAAATTGGTCCTCTAGATGATGTTGTTAACAAGATTGTCTTCAAGTCAGCTCGAGATAGTGATGGACATGGAACCCACACTGCTTCCACGATTGCAGGATCCATTGTTGCTAATGCCAGCTTGTTAGGTATTGCCAAAGGAAATGCTAGAGGTGGTGCCCCAAGTGCCAGACTTGCCATCTACAAGGCCTGTTGGTTTGGGTTTTGCTTTGATGCTGATGTTCTTTCTGCCATGGATGATGCCATTCATGATGGGGTTGATGTACTATCTCTTTCCCTTGGCCCTGATCCTCCCCAGCCAAGTTACTTCCAGGATGCAGTCAGTATAGGAGCATTCCATGCATTCCAAAAGGGAATTCTTGTTTCTGCTTCAGCTGGAAACTCAGTTTTTCCACGTACCGCGGGCAATGTTGCTCCTTGGATCCTCACTGTTGCTGCTAGCACGGTAGACAGGAAATTCAGTTCAAATATCTACCTTGGTAATTCAAAAGTTTTAAAGGGTTATTCTTTGAATCCAATAAAAATGGAGCATCCATATGGTTTGATATATGGAAGTGACGCTGCTGCTGCTGGGGTTCCAGCAACAAACGCAAGCTTCTGCATGAACAACACTCTAGATGCTACCTTAATCAAGGGTAAAATTGTGATCTGCACAATTGAAAAATTCACTGATAACAGAATAAATAAGTCCAAGGTAGTAAGGCAAGGAGGGGGTGTTGGAATGATACTTATTGATCATAATGCCAGAGATGTTGGTTTTCAGTTTGTCATCCCAAGCACTCTCATTGGTCAGGATGCCGTAGAAGAGCTTAAAGCATATATGAAGGCAGAGAAGAATCCTGTTGCTAGAATCTATCCAACAATAACTGTTGTCGGTACCAAACCTGCACCAGAAGTGGCAGCTTTTTCTTCCATGGGGCCAAATATAATAACACCAGATATTATCAAGCCTGACATCACAGCACCCGGTGTGAATATTTTGGCAGCATGGTCTCCAGTAGCAACTGATGCCACAGTTGAACAACGATCTGTCAACTATAACATCATTTCAGGAACATCAATGTCTTGTCCACACATATCTGCAGTTGCAGCAATTATAAAATCTCACAACCCCTTCTGGAGTCCTGCAGCAATAATGTCTGCAATAATGACAACAGCAACAGTTATGGATAACACACACCGCCTCATAGGAAGAGATCCAAATGGAACTCAGACCACACCGTTTGACTATGGATCTGGACATGTTAACCCAGTTGCAGCACTCAATCCTGGATTAGTATATGATTTTAGCTCCCAAGATATTCTCAGTTTCCTCTGCAGCAATGGGGCAAGCCCAGCACAACTTAAAAACCTCACAGGGGAAATTACTAAATGTCAGAAAGCTCCCACAGCTTCTTACAACTTCAATTATCCTTCAATTGGTGTGTCAAACTTGAATGGAAGTTTATCTGTTTATCGCACAGTTGCTTACTATGGTCAGGAACCAACAGTATATATTGCAAGTGTTGAAAATCCATCTGGGGTAAATGTTACAATTACACCAGCAGTACTAAAGTTCCGGAAAACAGGAGAGAAGATAACTTTCAGGATTGATTTCACCCCTTTCAAAAATAGCAATGGTAACTTTGTATTTGGTGCCTTGACATGGAACAATGGTAAACAAAGGGTTAGGAGTCCTATTGGTCTCAATGTGCTATCTACTTAG 2187 0.4271 MGDHSHPNSESVIRANHEMLASVTGSLSEAKAAAIHHYSKSFRGFSAVITPEQAYKLAEYNSVVSVFESKMNKLHTTHSWDFLGIDSVYKSNHAALDSTSNVIVGVIDSGVWPESESFNDYGLGPVPEKFKGECVTGDNFTLANCNKKIIGARFYSKGFEAEIGPLDDVVNKIVFKSARDSDGHGTHTASTIAGSIVANASLLGIAKGNARGGAPSARLAIYKACWFGFCFDADVLSAMDDAIHDGVDVLSLSLGPDPPQPSYFQDAVSIGAFHAFQKGILVSASAGNSVFPRTAGNVAPWILTVAASTVDRKFSSNIYLGNSKVLKGYSLNPIKMEHPYGLIYGSDAAAAGVPATNASFCMNNTLDATLIKGKIVICTIEKFTDNRINKSKVVRQGGGVGMILIDHNARDVGFQFVIPSTLIGQDAVEELKAYMKAEKNPVARIYPTITVVGTKPAPEVAAFSSMGPNIITPDIIKPDITAPGVNILAAWSPVATDATVEQRSVNYNIISGTSMSCPHISAVAAIIKSHNPFWSPAAIMSAIMTTATVMDNTHRLIGRDPNGTQTTPFDYGSGHVNPVAALNPGLVYDFSSQDILSFLCSNGASPAQLKNLTGEITKCQKAPTASYNFNYPSIGVSNLNGSLSVYRTVAYYGQEPTVYIASVENPSGVNVTITPAVLKFRKTGEKITFRIDFTPFKNSNGNFVFGALTWNNGKQRVRSPIGLNVLST* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01099 728 FunFam Subtilisin-like protease SBT1.5 101 332 - -
Rops3g01099 728 Pfam Peptidase inhibitor I9 7 74 IPR010259 -
Rops3g01099 728 ProSiteProfiles Serine proteases, subtilase domain profile. 79 582 - -
Rops3g01099 728 CDD PA_subtilisin_like 317 445 - -
Rops3g01099 728 SUPERFAMILY Subtilisin-like 74 586 IPR036852 GO:0004252|GO:0006508
Rops3g01099 728 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Rops3g01099 728 Pfam Fibronectin type-III domain 628 721 IPR041469 -
Rops3g01099 728 CDD Peptidases_S8_3 73 548 IPR034197 -
Rops3g01099 728 Gene3D Peptidase S8/S53 domain 101 594 IPR036852 GO:0004252|GO:0006508
Rops3g01099 728 ProSitePatterns Serine proteases, subtilase family, serine active site. 512 522 IPR023828 -
Rops3g01099 728 Gene3D - 311 452 - -
Rops3g01099 728 Gene3D - 599 725 - -
Rops3g01099 728 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 721 IPR045051 -
Rops3g01099 728 PRINTS Subtilisin serine protease family (S8) signature 99 118 IPR015500 -
Rops3g01099 728 PRINTS Subtilisin serine protease family (S8) signature 180 193 IPR015500 -
Rops3g01099 728 PRINTS Subtilisin serine protease family (S8) signature 511 527 IPR015500 -
Rops3g01099 728 Pfam Subtilase family 100 556 IPR000209 GO:0006508|GO:0008236
Rops3g01099 728 Pfam PA domain 358 431 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01099 Rops-Chr3 15107890 15112186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01099 1 721 Subtilisin-like Serine Gene Family AT2G04160 43.409 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01099 - - gmx:100792672 1246.49