Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01078 ATGGCTTCCTATACTAGTGGTGTAGTTATAAGGCATAGTGAACCACAACTTGTGGTGCCGGCAGAACTGACTCCAAGTGAAGCAAAACAGCTATCAGACATAGATGACCAACAAGGGCTTCGTATGCACCTCTCTTTCATCATGTTTCACAAAAGTAACCCAACTATGAAAGAAGCTGACCCTACAAAAGTCATAAAAAAAGCCATCTCTAAGGCACTTGTGCACGACTATCCATTGGCTGGGAGGCTCATCCAAGGGCCTAACAGGAAGCTCATGGTGGATTGCAGTGCTGAGGGGATTTTGTTCGTTGAAGCTGAGGCTGAAATTGCATTGGAGCAGCTAAGTGACTCAATTAGACCACCATGCCCATATAGCAAACACTTTCTATATCAAGTGCCAAATATAGAAAAGTGGAAATAA 420 0.4357 MASYTSGVVIRHSEPQLVVPAELTPSEAKQLSDIDDQQGLRMHLSFIMFHKSNPTMKEADPTKVIKKAISKALVHDYPLAGRLIQGPNRKLMVDCSAEGILFVEAEAEIALEQLSDSIRPPCPYSKHFLYQVPNIEKWK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01078 139 Gene3D - 9 138 IPR023213 -
Rops3g01078 139 PANTHER ACYL TRANSFERASE 4 9 119 - -
Rops3g01078 139 Pfam Transferase family 14 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01078 Rops-Chr3 14511830 14515251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01078 8 116 Monolignol Biosynthesis Gene Families AT5G48930 33.945 5.58e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01078 - K19861 ini:109152737 169.088