Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01071 ATGAGTTTTGAAGGTTCTTCTCTGCAATCCATGTCTACTACCTGTGGTTTCTTGTTCTTCTTCTTCACCCTTCTATTCTCTTTGTTCTCTTTTCTCATCTTCATCTCGAGGATGAAGCCATGGTGTAACTGCGAAATTTGCAAGAGCTACTTGACCATGAGTTGGGTTAACAAATTTTGCAATCTCTGCGATTGGTACACTCATCTTCTACGCAATTCCCCAACCGGAACCATTCACGTCCACGTGCTGGGAAACACCATTACATCAAACCCAGAAAACGTGGAGTACATTCTCAAAACCAATTTCCACAACTACCCAAAAGGGAAACCCTTCTCCACCATCCTCGGCGATCTTTTAGGCCGAGGAATCTTCAATGTCGACGGCGATTCTTGGAAGTTTCAACGCAAAATGGCAAGCTTAGAACTCGGAAGCGTCACGATTCGTTCCCACGCTATGGAACTAGTCACCGAAGAGATCCAAACAAGGCTAATTCCTCTCATGGCTTCAACTGAAAACAAAGTTTTAGACCTTCAAGACATCCTAAGACGTTTCTCATTCGACAACATTTGCAAATTTTCGTTCGGTCTTGACCCAGGTTGTCTTCTTACATCGCTTCCAGTTTCCAACCTCGCCGTGGCTTTCGACCTTGCTTCAAAGCTCTCGGCGGAGAGAGCCATGACGGCGTCACCGGTGATATGGAAAACGAAGCGGTTCCTCAACATTGGGTCAGAAAAAAAGCTGAAAGAAGCAATCAAAGTAGTAAACGATTTAGCCAATGAGATGATAAAGAAAAGAAGAGAAATGGGGCTCGGCACACAAAAGGACCTTCTCTCGCGTTTCATGAATTCGGTAAACGACGACGTTTACCTGAGGGACATCGTCGTTAGTTTCCTGTTAGCTGGTCGTGACACTGTTGCTGCCGCGTTGACCGGTTTCTTTGCTTTGCTGTCCAAAAGTCCCCAAGTGGAAACTCGGATCCGGGAGGAATTGGATCGGGTAATGGTTTCGGGTCATGGGTTTGCGAGTTTTGAACAAACGCGCGAAATGCACTATTTAAACGCAGCGATTCACGAGAGCATGAGGCTTTTTCCACCGATTCAATTTGATTCCAAGTATGCAAATGATGATGACGTGTTACCAGATGGCACTTTTGTACGGAAGGGAAGTCGGGTCACTTACCACCCGTATGCTATGGGTCGGATGGAGCAAATCTGGGGCCCCGATTGTCTCGAATTCAAACCCGAGAGATGGTTGCGGGACGGTGTGTTTGTACCAAAATGCCCTTTTAAGTACCCGGTTTTTCAGGCTGGGGTGAGGGTTTGTTTGGGAAAGGATTTGGCTTTGATGGAGATGAAGTCTGTGATTGCAGCTTTAGTCTCACGGTTTGATATTCGGGTCGTTGGATCCAATACGGAGCCCCAGTTTTCTCCAGGTCTTACTGCCACTTTCAGAGGCGGGTTGCCCGTTCAAATTTCTCAAAGAAGATGCTGA 1491 0.4655 MSFEGSSLQSMSTTCGFLFFFFTLLFSLFSFLIFISRMKPWCNCEICKSYLTMSWVNKFCNLCDWYTHLLRNSPTGTIHVHVLGNTITSNPENVEYILKTNFHNYPKGKPFSTILGDLLGRGIFNVDGDSWKFQRKMASLELGSVTIRSHAMELVTEEIQTRLIPLMASTENKVLDLQDILRRFSFDNICKFSFGLDPGCLLTSLPVSNLAVAFDLASKLSAERAMTASPVIWKTKRFLNIGSEKKLKEAIKVVNDLANEMIKKRREMGLGTQKDLLSRFMNSVNDDVYLRDIVVSFLLAGRDTVAAALTGFFALLSKSPQVETRIREELDRVMVSGHGFASFEQTREMHYLNAAIHESMRLFPPIQFDSKYANDDDVLPDGTFVRKGSRVTYHPYAMGRMEQIWGPDCLEFKPERWLRDGVFVPKCPFKYPVFQAGVRVCLGKDLALMEMKSVIAALVSRFDIRVVGSNTEPQFSPGLTATFRGGLPVQISQRRC* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01071 496 Pfam Cytochrome P450 86 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 CDD CYP86A 80 487 - -
Rops3g01071 496 PANTHER CYTOCHROME P450 33 488 - -
Rops3g01071 496 SUPERFAMILY Cytochrome P450 61 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g01071 496 Coils Coil 247 267 - -
Rops3g01071 496 Gene3D Cytochrome P450 49 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01071 Rops-Chr3 14321776 14323415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g01071 32 494 Cytochrome P450 AT2G27690 64.000 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g01071 K20624 - gmx:100813091 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03467 8 74017979 74019394 Rops3g01071 3 14321776 14323415 ECH
Rops3g01071 3 14321776 14323415 Rops3g01071 3 14321776 14323415 ECH